Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 210 2e-49 seq1494 116 3e-21 >seq1 Length=925270 Score = 210 bits (232), Expect = 2e-49 Identities = 380/546 (70%), Gaps = 11/546 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||||||||||||| | ||||| || || |||||||| | || ||| | ||| || Sbjct 578882 ATATGGCGCATGTACAAGCAAGCGGAGGCCTCTTTCTGGACAGCAGAAGAGATAGATCTG 578823 Query 61147 TCCAAAGACATGAATGACTGGGAGCGT----TTATCGAGCGGTGAACAACATTTCATTAA 61202 || | ||| |||||| | | | | | ||| || || | ||||||||| Sbjct 578822 TCGCACGACCACTGGGACTGGAACCATCGCCTCAACGA-CGACGAGCGACATTTCATCTC 578764 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||| || | || ||||| || || || || || || || || ||||| | | || || Sbjct 578763 ACACGTCCTCGCCTTCTTCGCTGCATCCGATGGCATAGTGAACGAGAACCTCGTAGAGCG 578704 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | |||||||| | |||| || || ||||||||||||||||| || || Sbjct 578703 CTTCTCGAACGAGGTGCAGGCTGCGGAAGCACGGTGTTTCTACGGCTTCCAAATCATGAT 578644 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| | || || || | ||| | || |||||||| ||||||| ||| | | Sbjct 578643 GGAGAACATACATTCCGAAACATACTCGCTCCTAATCGATACATACATCAAGGACCCGCA 578584 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 ||||| || || | || | ||||||||| | ||||| | ||| ||| ||||| Sbjct 578583 AGAACGCGACCGTCTATTTGACGCCATCGAGGCAATACCATGCATCAAGAAGAAGGCGGA 578524 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAA-CGG-CTACATTTGGTGAACGATTGCTGGCA 61500 ||||| || |||||| ||| |||| ||| | | || | ||| ||| || |||| Sbjct 578523 CTGGGCTCTCCGCTGGATC-GCAG-ACAAGCGGTCGAGTTTCGCTGAGCGACTGGTGGCC 578466 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 || || | || ||||| | |||||| || ||||| ||||| || || ||| | ||| Sbjct 578465 TTCGCCGCCGTGGAGGGCATCTTTTTCTCCGGCTCGTTCGCCGCCATATTCTGGCTCAAG 578406 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGA-TATCACGCGACGAGGG 61619 ||||| || || |||||||| ||||| ||| || ||||||| |||| ||||||||||| Sbjct 578405 AAACGCGGCCTCATGCCCGGACTGACATTCTCAAACGAGTTGATTATC-CGCGACGAGGG 578347 Query 61620 CATGCA 61625 ||||| Sbjct 578346 AATGCA 578341 Score = 196 bits (216), Expect = 4e-45 Identities = 389/570 (68%), Gaps = 7/570 (1%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| || |||||| |||| || Sbjct 580182 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCTTTCTGGACTGTCGAGGAGATCGACCTG 580241 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 || || ||| | | |||||| | ||| | | ||| | || | || ||||| Sbjct 580242 TCGAAGGACCTCCACGACTGGAACAACCGTATGAACGA-CAACGAGCGTCACTTCATCTC 580300 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || || || || || || |||||||| ||||| || || | | ||||| Sbjct 580301 GCACGTCCTCGCCTTTTTCGCTGCCTCTGACGGTATTGTCAACGAAAACCTTGTCGAACG 580360 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| | | |||||||| | | ||||| || || ||||||||||||||||| || Sbjct 580361 TTTCTCCAACGAGGTGCAGGCTGCTGAGGCACGATGCTTCTACGGCTTCCAGATCATGAT 580420 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | |||||||| || ||||||| ||| | | Sbjct 580421 GGAGAACATCCACTCCGAGACGTATTCGCTCCTCATCGACACCTACATCAAGGACCCGAA 580480 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 | | || || | | ||| |||||||||| || || || | || ||| ||||| Sbjct 580481 GCAGCGCGAGCACCTCTTCGATGCCATCGACACCATCCCTTGCATCAAAAAGAAGGCGGA 580540 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACGG-CTACATTTGGTGAACGATTGCTGGCAT 61501 |||||| || |||||| ||| | ||| | | || | || || | | || | Sbjct 580541 CTGGGCCCTCCGCTGGATC-GCAGACGAGCGGTCGAGCTTCGCCGAGCGTCTCGTCGCTT 580599 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 | || | ||||||||| | || ||| ||| || ||||| | ||||| ||| | |||| Sbjct 580600 TCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTTGCGTCGATCTTCTGGCTCAAGA 580659 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | ||||| || ||||| || || || ||| || ||| |||| || |||||||||| Sbjct 580660 AGCGTGGTCTCATGCCTGGCCTCACGTTCTCTAACGAGCTGATCAGCCGTGACGAGGGCA 580719 Query 61622 TGCATTGTGATTTTGCTGTTTTGCTATTCA 61651 |||| || || ||| ||||| |||| Sbjct 580720 TGCACACCGACTTCGCTTGCTTGCTCTTCA 580749 >seq1494 Length=22227 Score = 116 bits (128), Expect = 3e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || ||||| || |||||||| || |||||||| ||||| || || ||||| |||| Sbjct 18356 AAGAGATCGGGGATCCAGAGTGCATAGAAGAGGTCGCGGGCACGGACTTCCTCTTTGCCA 18297 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 ||||| || || | ||||||||||| |||| ||| ||||||| || || |||||||| Sbjct 18296 TGATTCTTTCGGAGATCGAGGAACTCGAAGACATCGTCATGCCAGGGCTCGAGGTAGATA 18237 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 ||||| | ||| || ||| ||||||||||| ||||| || || Sbjct 18236 GCGAAAGCGCCGGGTCGCTTGTTACCACCTTGGTCAACGTATCGGGC 18190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397557446805920