Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28]
18,903 sequences; 60,325,844 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq18311 286 5e-75
seq18249 282 6e-74
seq18322 143 4e-32
seq18255 96.9 5e-18
>seq18311
Length=601
Score = 286 bits (316), Expect = 5e-75
Identities = 205/231 (89%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |
Sbjct 541 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 484
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 483 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 424
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| ||||||||| | | ||||| || | |||||||||||||||||||
Sbjct 423 ACCCAGACCTTCCGGCCAAGGAAAAA-ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 365
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 364 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 314
>seq18249
Length=1136
Score = 282 bits (312), Expect = 6e-74
Identities = 205/232 (88%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |
Sbjct 924 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 867
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 866 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 807
Query 120 ACCCGGACCTGTCGGCCAA-GGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|||| ||||| ||||||| || | | ||||| || | ||||||||||||||||||
Sbjct 806 ACCCAGACCTTCCGGCCAAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGC 747
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 746 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 695
>seq18322
Length=569
Score = 143 bits (158), Expect = 4e-32
Identities = 95/103 (92%), Gaps = 2/103 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |
Sbjct 315 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 258
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103
||||||||||| ||| |||||||||| |||||||||| |||||
Sbjct 257 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGA 215
>seq18255
Length=1201
Score = 96.9 bits (106), Expect = 5e-18
Identities = 63/67 (94%), Gaps = 2/67 (3%)
Strand=Plus/Minus
Query 5 AAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCG 64
|||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||
Sbjct 1174 AAAGGGCAGGGACGTAATCAACGCGAGC-TGATGACTCACGCTTACTAGGAA-TTCCTCG 1117
Query 65 TTGAAGA 71
|||||||
Sbjct 1116 TTGAAGA 1110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751862291645
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |