Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq18311 286 5e-75 seq18249 282 6e-74 seq18322 143 4e-32 seq18255 96.9 5e-18 >seq18311 Length=601 Score = 286 bits (316), Expect = 5e-75 Identities = 205/231 (89%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 541 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 484 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 483 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 424 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||| | | ||||| || | ||||||||||||||||||| Sbjct 423 ACCCAGACCTTCCGGCCAAGGAAAAA-ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 365 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 364 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 314 >seq18249 Length=1136 Score = 282 bits (312), Expect = 6e-74 Identities = 205/232 (88%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 924 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 867 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 866 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 807 Query 120 ACCCGGACCTGTCGGCCAA-GGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| ||||| ||||||| || | | ||||| || | |||||||||||||||||| Sbjct 806 ACCCAGACCTTCCGGCCAAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGC 747 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 746 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 695 >seq18322 Length=569 Score = 143 bits (158), Expect = 4e-32 Identities = 95/103 (92%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 315 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 258 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 ||||||||||| ||| |||||||||| |||||||||| ||||| Sbjct 257 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGA 215 >seq18255 Length=1201 Score = 96.9 bits (106), Expect = 5e-18 Identities = 63/67 (94%), Gaps = 2/67 (3%) Strand=Plus/Minus Query 5 AAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCG 64 |||||||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||| Sbjct 1174 AAAGGGCAGGGACGTAATCAACGCGAGC-TGATGACTCACGCTTACTAGGAA-TTCCTCG 1117 Query 65 TTGAAGA 71 ||||||| Sbjct 1116 TTGAAGA 1110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751862291645