Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28]
18,903 sequences; 60,325,844 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq18252 158 7e-37
seq18249 158 7e-37
seq18245 158 7e-37
seq5624 113 3e-23
seq18255 111 9e-23
>seq18252
Length=1278
Score = 158 bits (174), Expect = 7e-37
Identities = 105/117 (90%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||||||||||||||||||| || || | | ||||||
Sbjct 274 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAAATTGAGGTCGCCC 215
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 214 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 158
>seq18249
Length=1136
Score = 158 bits (174), Expect = 7e-37
Identities = 105/117 (90%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||||||||||||||||||| || || | | ||||||
Sbjct 394 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAAATTGAGGTCGCCC 335
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 334 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 278
>seq18245
Length=1447
Score = 158 bits (174), Expect = 7e-37
Identities = 105/117 (90%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||||||||||||||||||| || || | | ||||||
Sbjct 128 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAAATTGAGGTCGCCC 69
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 68 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 12
>seq5624
Length=991
Score = 113 bits (124), Expect = 3e-23
Identities = 97/114 (85%), Gaps = 6/114 (5%)
Strand=Plus/Plus
Query 2 AACCCAAAG-ACTTTG-ATTTCTC--GTAAGGT-GCCGAGCGAGTCAAAATGATA-ACAT 55
||||||||| |||||| |||||| ||||||| ||||||||| ||| | || | |
Sbjct 850 AACCCAAAGTACTTTGTATTTCTACGGTAAGGTCGCCGAGCGACACAATAAAATTGAGGT 909
Query 56 CGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATC 109
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 910 CGCCCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATC 963
>seq18255
Length=1201
Score = 111 bits (122), Expect = 9e-23
Identities = 79/91 (87%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 27 AGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGT 86
||| | ||||||| |||| | ||| ||||||||||||||||||||||||||||| ||
Sbjct 290 AGGCGACGAGCGACACAAATTAATAGGGTCGCCCGATCCCTAGTCGGCATAGTTTACTGT 231
Query 87 TAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||| ||||||||||||||| |||||
Sbjct 230 TAAGACTACAACGGTATCTGATCGTTTTCGA 200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278350663170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |