Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq18252 158 7e-37 seq18249 158 7e-37 seq18245 158 7e-37 seq5624 113 3e-23 seq18255 111 9e-23 >seq18252 Length=1278 Score = 158 bits (174), Expect = 7e-37 Identities = 105/117 (90%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | |||||| Sbjct 274 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAAATTGAGGTCGCCC 215 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 214 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 158 >seq18249 Length=1136 Score = 158 bits (174), Expect = 7e-37 Identities = 105/117 (90%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | |||||| Sbjct 394 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAAATTGAGGTCGCCC 335 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 334 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 278 >seq18245 Length=1447 Score = 158 bits (174), Expect = 7e-37 Identities = 105/117 (90%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | |||||| Sbjct 128 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAAATTGAGGTCGCCC 69 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 68 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 12 >seq5624 Length=991 Score = 113 bits (124), Expect = 3e-23 Identities = 97/114 (85%), Gaps = 6/114 (5%) Strand=Plus/Plus Query 2 AACCCAAAG-ACTTTG-ATTTCTC--GTAAGGT-GCCGAGCGAGTCAAAATGATA-ACAT 55 ||||||||| |||||| |||||| ||||||| ||||||||| ||| | || | | Sbjct 850 AACCCAAAGTACTTTGTATTTCTACGGTAAGGTCGCCGAGCGACACAATAAAATTGAGGT 909 Query 56 CGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATC 109 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 910 CGCCCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATC 963 >seq18255 Length=1201 Score = 111 bits (122), Expect = 9e-23 Identities = 79/91 (87%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 27 AGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGT 86 ||| | ||||||| |||| | ||| ||||||||||||||||||||||||||||| || Sbjct 290 AGGCGACGAGCGACACAAATTAATAGGGTCGCCCGATCCCTAGTCGGCATAGTTTACTGT 231 Query 87 TAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||| ||||||||||||||| ||||| Sbjct 230 TAAGACTACAACGGTATCTGATCGTTTTCGA 200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278350663170