Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq18269 405 9e-111 seq18249 383 3e-104 seq18255 259 9e-67 seq18252 188 1e-45 seq18298 129 1e-27 >seq18269 Length=905 Score = 405 bits (448), Expect = 9e-111 Identities = 279/313 (89%), Gaps = 2/313 (1%) Strand=Plus/Plus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||| ||| ||| ||| ||| || ||| |||||||||||||||||||| |||||| Sbjct 115 GTCTGGCTGGGTCTTACCTCTTGGTGAGCCGGCATGCCCTTCACTGGGTGTGTCGGGGAA 174 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||| Sbjct 175 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTGAATACATT 234 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 235 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 294 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | |||||||| ||| |||||||||||||||||| Sbjct 295 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGA 354 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 |||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 355 TTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 413 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 414 CGAAGGTTAGGGG 426 >seq18249 Length=1136 Score = 383 bits (424), Expect = 3e-104 Identities = 252/277 (91%), Gaps = 1/277 (0%) Strand=Plus/Plus Query 42 CCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAA 101 |||||||||||||||| |||||| ||||||||||||| |||| ||||||||||||||||| Sbjct 1 CCCTTCACTGGGTGTGTCGGGGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAA 60 Query 102 AGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATT 161 ||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 61 AGCAGGCCTATGCCTGAATACATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATT 120 Query 162 TTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCA 221 |||||||||||||| ||||||||||||||||||||||||| ||||| | |||||||| Sbjct 121 TTGTTGGTTTCTAGAGTCGCCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCA 180 Query 222 ATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCA 281 ||| |||||||||||||||||||||| ||||||||||||||||||||||| || ||| Sbjct 181 GTTGCTAGAGGTGAAATTCTTGGATTTACTGAAGACTAACTACTGCGAAAGCATTTGCCA 240 Query 282 AGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||||||||| ||||||| |||||||| Sbjct 241 AGGATGTTTTCATTAATCA-AGAACGAAGGTTAGGGG 276 >seq18255 Length=1201 Score = 259 bits (286), Expect = 9e-67 Identities = 172/190 (91%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 10 ATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTAATG 69 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||||||||| ||||| | |||||||| ||| ||||||||||||||||||||| Sbjct 70 ATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGATTT 129 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 | ||||||||||||||||||||||| || |||||||||||||||||||||| |||||| Sbjct 130 ACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGA 188 Query 309 AAGTTAGGGG 318 | |||||||| Sbjct 189 AGGTTAGGGG 198 >seq18252 Length=1278 Score = 188 bits (208), Expect = 1e-45 Identities = 132/149 (89%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 170 TTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAG 229 |||||| ||||||||||||||||||||||||| ||||| | |||||||| ||| || Sbjct 9 TTCTAGAGTCGCCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAG 68 Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289 |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| Sbjct 69 AGGTGAAATTCTTGGATTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTT 128 Query 290 TTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||| ||||||| |||||||| Sbjct 129 TTCATTAATCA-AGAACGAAGGTTAGGGG 156 >seq18298 Length=737 Score = 129 bits (142), Expect = 1e-27 Identities = 93/107 (87%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 23 CCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTG 82 |||| ||| || || | | ||||||||||||||| |||||| ||||||||||||| ||| Sbjct 624 CCTTGTGGTGACGCG-ANGNCCTTCACTGGGTGTGTCGGGGAACCAGGACTTTTACCTTG 682 Query 83 AAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 | |||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 683 AGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTGAATACATTAGCA 729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915026999744