Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28]
18,903 sequences; 60,325,844 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq18269 405 9e-111
seq18249 383 3e-104
seq18255 259 9e-67
seq18252 188 1e-45
seq18298 129 1e-27
>seq18269
Length=905
Score = 405 bits (448), Expect = 9e-111
Identities = 279/313 (89%), Gaps = 2/313 (1%)
Strand=Plus/Plus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65
||| ||| ||| ||| ||| ||| || ||| |||||||||||||||||||| ||||||
Sbjct 115 GTCTGGCTGGGTCTTACCTCTTGGTGAGCCGGCATGCCCTTCACTGGGTGTGTCGGGGAA 174
Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125
||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||
Sbjct 175 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTGAATACATT 234
Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 235 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 294
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||||||||||||| ||||| | |||||||| ||| ||||||||||||||||||
Sbjct 295 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGA 354
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
|||| ||||||||||||||||||||||| || |||||||||||||||||||||| |||
Sbjct 355 TTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 413
Query 306 CGAAAGTTAGGGG 318
|||| ||||||||
Sbjct 414 CGAAGGTTAGGGG 426
>seq18249
Length=1136
Score = 383 bits (424), Expect = 3e-104
Identities = 252/277 (91%), Gaps = 1/277 (0%)
Strand=Plus/Plus
Query 42 CCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAA 101
|||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||||
Sbjct 1 CCCTTCACTGGGTGTGTCGGGGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAA 60
Query 102 AGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATT 161
||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 61 AGCAGGCCTATGCCTGAATACATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATT 120
Query 162 TTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCA 221
|||||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||
Sbjct 121 TTGTTGGTTTCTAGAGTCGCCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCA 180
Query 222 ATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCA 281
||| |||||||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct 181 GTTGCTAGAGGTGAAATTCTTGGATTTACTGAAGACTAACTACTGCGAAAGCATTTGCCA 240
Query 282 AGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
||||||||||||||||||| ||||||| ||||||||
Sbjct 241 AGGATGTTTTCATTAATCA-AGAACGAAGGTTAGGGG 276
>seq18255
Length=1201
Score = 259 bits (286), Expect = 9e-67
Identities = 172/190 (91%), Gaps = 1/190 (1%)
Strand=Plus/Plus
Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 10 ATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTAATG 69
Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248
||||||||||||||| ||||| | |||||||| ||| |||||||||||||||||||||
Sbjct 70 ATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGATTT 129
Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308
| ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||
Sbjct 130 ACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGA 188
Query 309 AAGTTAGGGG 318
| ||||||||
Sbjct 189 AGGTTAGGGG 198
>seq18252
Length=1278
Score = 188 bits (208), Expect = 1e-45
Identities = 132/149 (89%), Gaps = 1/149 (1%)
Strand=Plus/Plus
Query 170 TTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAG 229
|||||| ||||||||||||||||||||||||| ||||| | |||||||| ||| ||
Sbjct 9 TTCTAGAGTCGCCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAG 68
Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289
|||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct 69 AGGTGAAATTCTTGGATTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTT 128
Query 290 TTCATTAATCAGTGAACGAAAGTTAGGGG 318
||||||||||| ||||||| ||||||||
Sbjct 129 TTCATTAATCA-AGAACGAAGGTTAGGGG 156
>seq18298
Length=737
Score = 129 bits (142), Expect = 1e-27
Identities = 93/107 (87%), Gaps = 1/107 (1%)
Strand=Plus/Plus
Query 23 CCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTG 82
|||| ||| || || | | ||||||||||||||| |||||| ||||||||||||| |||
Sbjct 624 CCTTGTGGTGACGCG-ANGNCCTTCACTGGGTGTGTCGGGGAACCAGGACTTTTACCTTG 682
Query 83 AAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129
| |||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 683 AGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTGAATACATTAGCA 729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915026999744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |