Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28]
18,903 sequences; 60,325,844 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq18274 260 6e-67
seq16060 251 3e-64
seq18295 168 3e-39
seq18265 161 4e-37
seq18283 150 7e-34
seq18247 140 1e-30
seq18305 86.0 3e-14
>seq18274
Length=795
Score = 260 bits (288), Expect = 6e-67
Identities = 327/448 (73%), Gaps = 32/448 (7%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAAT-GGGAGGTAAA 81
||||| || | || | ||||||||||||||||||||||||||| |||| ||| ||| ||
Sbjct 337 TGTGATGCGCTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATCGGGTGGTGAA 396
Query 82 TTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 141
|| | ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||
Sbjct 397 TTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAG 456
Query 142 ATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCT 201
||||||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||
Sbjct 457 ATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCT 516
Query 202 TGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
|| | ||| | | | | | |||| || | | | |||||||| | | | |
Sbjct 517 TGAAGTCAGTCGCGTCGTCCGGAACTCAGCCTTGCTTTTGCTTGGTGCACTTTCCGGTTG 576
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
| || ||||||| | | | |||||| || ||| | |||||||| |||| ||
Sbjct 577 ACGGGTCAGCATCGATTTTGACCGTCGGAAAAGGGCTGGAGTAATGTGGCACCCT--CGG 634
Query 322 GGGTGTTATAGCC------------CGG-GGT---------GGAATGCGGCCCGCC--TG 357
| ||||||||| | ||| ||| |||| || || ||||
Sbjct 635 GTGTGTTATAGACTCTGGTCGCATACGGCGGTTGGGATCGAGGAACGCAGCGCGCCGTAA 694
Query 358 GACTGAGGTCCGCGCTC-----CGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGT 412
| | | ||| ||| | | || |||||||||||| |||||| | ||| || |||||
Sbjct 695 GGCAGGGGTTCGCCCACTTTCGCGCTTAGGATGCTGGCATAATGGCTTTAAACGACCCGT 754
Query 413 CTTGGAACACGGACCAAGGAGTCTAACA 440
|||| |||||||||||||||||||||||
Sbjct 755 CTTGAAACACGGACCAAGGAGTCTAACA 782
>seq16060
Length=803
Score = 251 bits (278), Expect = 3e-64
Identities = 222/271 (82%), Gaps = 12/271 (4%)
Strand=Plus/Plus
Query 402 AAGCGGCCCGT-CTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTG-TTTGGGT 459
|| || ||||| || | |||||||||||||||||||||||| |||||||| |||||||
Sbjct 529 AACCGACCCGTTCTAGAAACACGGACCAAGGAGTCTAACATACCTGCGAGTGGTTTGGGT 588
Query 460 GTC-AAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCC-----GTGAGGGTGC 513
||||||| |||||||||||||||||| || || || ||| ||| ||| ||
Sbjct 589 ACGGAAACCCGAGCGCGTAATGAAAGTGAA---AGTTGAGACCCCTGTCGGTGGGGG-GC 644
Query 514 ACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACC 573
| | || ||| ||||| || || || |||| | | ||||||| ||||||||||
Sbjct 645 ATCGACGCCCGGACCTGACGTTCTCTGAAGGATCCGCGGTAGAGCATGTATGTTGGGACC 704
Query 574 CGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTC 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 705 CGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTC 764
Query 634 GCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664
| |||| ||||| ||||||||||||||||||
Sbjct 765 GTAGCGATTCTGACGTGCAAATCGATCGTCA 795
>seq18295
Length=713
Score = 168 bits (186), Expect = 3e-39
Identities = 119/136 (88%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||||| || | || | ||||||||||||||||||||||||||| ||||||| ||| |||
Sbjct 570 TGTGATGCGCTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAAT 629
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
| | ||||||||||||||||||| |||||||||||||| ||||||| |||| ||||||
Sbjct 630 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 689
Query 143 TGAAAAGCACTTTGGA 158
||||||||||||||||
Sbjct 690 TGAAAAGCACTTTGGA 705
>seq18265
Length=896
Score = 161 bits (178), Expect = 4e-37
Identities = 94/97 (97%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 587 ACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGG 646
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct 37 ACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGA 96
Query 647 CGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||||||||||||||||||||||||||||||
Sbjct 97 CGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 133
>seq18283
Length=817
Score = 150 bits (166), Expect = 7e-34
Identities = 116/138 (84%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567
||| ||| | || ||| ||||| || || || |||| | | ||||||| ||||
Sbjct 669 GGGGGCATCGACGCCCGGACCTGACGTTCTCTGAAGGATCCGCGGTAGAGCATGTATGTT 728
Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 729 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 788
Query 628 AGGCTCGCAGCGGTTCTG 645
||||||| |||| |||||
Sbjct 789 AGGCTCGTAGCGATTCTG 806
>seq18247
Length=1422
Score = 140 bits (154), Expect = 1e-30
Identities = 97/110 (88%), Gaps = 1/110 (1%)
Strand=Plus/Plus
Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14 AGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 73
Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA-TCGT 662
||||||||||||||||||||| |||| || | ||| | | ||| ||||
Sbjct 74 GGAAACTCTGGTGGAGGCTCGTAGCGATTTNGACGTNAANANCGACTCGT 123
>seq18305
Length=686
Score = 86.0 bits (94), Expect = 3e-14
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGC 119
||||||| ||| ||| ||| |||| | ||||||||||||||||||| || ||||||||||
Sbjct 609 GCAGCTCAAAACGGGTGGTGAATTCCATCTAAAGCTAAATATTGGCGAGTGACCGATAGC 668
Query 120 GCACAAGTAGAGTGA 134
| ||||||| ||||
Sbjct 669 GAACAAGTACCGTGA 683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079594530650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |