Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28]
18,903 sequences; 60,325,844 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq18269 233 2e-59
seq18249 233 2e-59
seq18255 147 2e-33
seq18298 91.5 2e-16
seq18252 80.6 3e-13
>seq18269
Length=905
Score = 233 bits (258), Expect = 2e-59
Identities = 166/189 (88%), Gaps = 1/189 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||
Sbjct 171 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTGAATA 230
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct 231 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 289
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||||||
Sbjct 290 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 349
Query 181 TTGGATTTA 189
|||||||||
Sbjct 350 TTGGATTTA 358
>seq18249
Length=1136
Score = 233 bits (258), Expect = 2e-59
Identities = 166/189 (88%), Gaps = 1/189 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||
Sbjct 21 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTGAATA 80
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct 81 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 139
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||||||
Sbjct 140 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 199
Query 181 TTGGATTTA 189
|||||||||
Sbjct 200 TTGGATTTA 208
>seq18255
Length=1201
Score = 147 bits (162), Expect = 2e-33
Identities = 109/126 (87%), Gaps = 1/126 (1%)
Strand=Plus/Plus
Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123
||| ||||||||||| ||||||||||||||||||||||||| ||||||||| |||| |
Sbjct 6 TACTATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCC-G 64
Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183
||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||||||
Sbjct 65 TAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTG 124
Query 184 GATTTA 189
||||||
Sbjct 125 GATTTA 130
>seq18298
Length=737
Score = 91.5 bits (100), Expect = 2e-16
Identities = 61/68 (90%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||
Sbjct 662 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTGAATA 721
Query 61 CATTACCA 68
||||| ||
Sbjct 722 CATTAGCA 729
>seq18252
Length=1278
Score = 80.6 bits (88), Expect = 3e-13
Identities = 59/69 (86%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||||||
Sbjct 20 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 79
Query 181 TTGGATTTA 189
|||||||||
Sbjct 80 TTGGATTTA 88
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511906241120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |