Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq18311 457 2e-126 seq18249 455 6e-126 seq18322 188 1e-45 seq18255 107 4e-21 seq5624 107 4e-21 >seq18311 Length=601 Score = 457 bits (506), Expect = 2e-126 Identities = 289/310 (93%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||| Sbjct 232 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 291 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 292 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 351 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 352 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTT-CCTTGGCC 410 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 411 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 470 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 471 GCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 530 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 531 GCCCTTTGTA 540 >seq18249 Length=1136 Score = 455 bits (504), Expect = 6e-126 Identities = 289/311 (93%), Gaps = 2/311 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||| Sbjct 613 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 672 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 673 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 732 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT-GGC 197 |||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||| Sbjct 733 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTCCTTTGGC 792 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 793 CGGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 852 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 |||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||||| Sbjct 853 TGCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCC 912 Query 318 TGCCCTTTGTA 328 ||||||||||| Sbjct 913 TGCCCTTTGTA 923 >seq18322 Length=569 Score = 188 bits (208), Expect = 1e-45 Identities = 165/199 (83%), Gaps = 20/199 (10%) Strand=Plus/Plus Query 149 GGCCGCACGC-GCGCTACACTGACAGAGCCAACGA----GTTCATCACCTT-----GGCC 198 ||||| |||| ||||||||||||||||||| ||| ||| | || | | || Sbjct 117 GGCCG-ACGCCGCGCTACACTGACAGAGCCGACGTCGAGGTTTTTTTCCGTTTTCGGTCC 175 Query 199 GGAA---GGTC--TGGGTAA-TCTTGTT---AAACTCTGTCGTGCTGGGGATAGAGCATT 249 || | ||| ||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct 176 GGGAACGGGTACGTGGGTAAGTCTTGTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATT 235 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||| Sbjct 236 GCAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGAT 295 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 296 TACGTCCCTGCCCTTTGTA 314 >seq18255 Length=1201 Score = 107 bits (118), Expect = 4e-21 Identities = 86/98 (88%), Gaps = 7/98 (7%) Strand=Plus/Plus Query 235 TGGGGA--TAGAG-CATTG-CAATTA--TTG-CTCTTCAACGAGGAATGCCTAGTAAGCG 287 |||||| ||||| ||||| || ||| ||| |||||||||||||||| ||||||||||| Sbjct 1077 TGGGGAGGTAGAGACATTGTCACTTAATTTGTCTCTTCAACGAGGAATTCCTAGTAAGCG 1136 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTT 325 | ||||||||| ||||||||||||||||||||||||| Sbjct 1137 TGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTT 1174 >seq5624 Length=991 Score = 107 bits (118), Expect = 4e-21 Identities = 82/91 (90%), Gaps = 6/91 (7%) Strand=Plus/Minus Query 199 GGAAGGTCT--GGGTAATCTTGTT-AAACTCTGTCGTGC-TGGGGATAGAGC-ATTG-CA 252 |||||||| |||||||||||| |||||||||||||| |||||||||||| |||| || Sbjct 99 GGAAGGTCGTAGGGTAATCTTGTAGAAACTCTGTCGTGCGTGGGGATAGAGCTATTGACA 40 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTA 283 ||||||||||||||||||||||| ||||||| Sbjct 39 ATTATTGCTCTTCAACGAGGAATTCCTAGTA 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947020950784