Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28]
18,903 sequences; 60,325,844 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq18311 457 2e-126
seq18249 455 6e-126
seq18322 188 1e-45
seq18255 107 4e-21
seq5624 107 4e-21
>seq18311
Length=601
Score = 457 bits (506), Expect = 2e-126
Identities = 289/310 (93%), Gaps = 2/310 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||| |||||||||||| ||||| || |||||||||||||||||
Sbjct 232 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 291
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||| || || || ||| || ||||||||||||||||||||||||||||||||||||
Sbjct 292 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 351
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
|||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||
Sbjct 352 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTT-CCTTGGCC 410
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 411 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 470
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||||||
Sbjct 471 GCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 530
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 531 GCCCTTTGTA 540
>seq18249
Length=1136
Score = 455 bits (504), Expect = 6e-126
Identities = 289/311 (93%), Gaps = 2/311 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||| |||||||||||| ||||| || |||||||||||||||||
Sbjct 613 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 672
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||| || || || ||| || ||||||||||||||||||||||||||||||||||||
Sbjct 673 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 732
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT-GGC 197
|||||||||||||||||||||||||||||||||||||||| |||||| | |||| |||
Sbjct 733 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTCCTTTGGC 792
Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 793 CGGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 852
Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317
|||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||
Sbjct 853 TGCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCC 912
Query 318 TGCCCTTTGTA 328
|||||||||||
Sbjct 913 TGCCCTTTGTA 923
>seq18322
Length=569
Score = 188 bits (208), Expect = 1e-45
Identities = 165/199 (83%), Gaps = 20/199 (10%)
Strand=Plus/Plus
Query 149 GGCCGCACGC-GCGCTACACTGACAGAGCCAACGA----GTTCATCACCTT-----GGCC 198
||||| |||| ||||||||||||||||||| ||| ||| | || | | ||
Sbjct 117 GGCCG-ACGCCGCGCTACACTGACAGAGCCGACGTCGAGGTTTTTTTCCGTTTTCGGTCC 175
Query 199 GGAA---GGTC--TGGGTAA-TCTTGTT---AAACTCTGTCGTGCTGGGGATAGAGCATT 249
|| | ||| ||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 176 GGGAACGGGTACGTGGGTAAGTCTTGTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATT 235
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
|||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||||
Sbjct 236 GCAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGAT 295
Query 310 TACGTCCCTGCCCTTTGTA 328
|||||||||||||||||||
Sbjct 296 TACGTCCCTGCCCTTTGTA 314
>seq18255
Length=1201
Score = 107 bits (118), Expect = 4e-21
Identities = 86/98 (88%), Gaps = 7/98 (7%)
Strand=Plus/Plus
Query 235 TGGGGA--TAGAG-CATTG-CAATTA--TTG-CTCTTCAACGAGGAATGCCTAGTAAGCG 287
|||||| ||||| ||||| || ||| ||| |||||||||||||||| |||||||||||
Sbjct 1077 TGGGGAGGTAGAGACATTGTCACTTAATTTGTCTCTTCAACGAGGAATTCCTAGTAAGCG 1136
Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTT 325
| ||||||||| |||||||||||||||||||||||||
Sbjct 1137 TGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTT 1174
>seq5624
Length=991
Score = 107 bits (118), Expect = 4e-21
Identities = 82/91 (90%), Gaps = 6/91 (7%)
Strand=Plus/Minus
Query 199 GGAAGGTCT--GGGTAATCTTGTT-AAACTCTGTCGTGC-TGGGGATAGAGC-ATTG-CA 252
|||||||| |||||||||||| |||||||||||||| |||||||||||| |||| ||
Sbjct 99 GGAAGGTCGTAGGGTAATCTTGTAGAAACTCTGTCGTGCGTGGGGATAGAGCTATTGACA 40
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTA 283
||||||||||||||||||||||| |||||||
Sbjct 39 ATTATTGCTCTTCAACGAGGAATTCCTAGTA 9
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947020950784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |