Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28]
18,903 sequences; 60,325,844 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq18325 443 7e-122
seq18291 387 4e-105
seq18246 336 7e-90
seq18320 313 8e-83
seq18243 280 5e-73
seq18257 221 4e-55
seq18236 203 1e-49
seq18254 138 4e-30
seq18301 131 5e-28
>seq18325
Length=510
Score = 443 bits (490), Expect = 7e-122
Identities = 248/250 (99%), Gaps = 0/250 (0%)
Strand=Plus/Minus
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 265 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 206
Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 205 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 146
Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 145 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 86
Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 85 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 26
Query 534 TCACTTTCTG 543
|||||||||
Sbjct 25 CCACTTTCTG 16
>seq18291
Length=720
Score = 387 bits (428), Expect = 4e-105
Identities = 287/332 (86%), Gaps = 5/332 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 328 CTTTTGTTCTACTCGAGATTTCTGTTCTCGATGAGTCCCCCTTAGGACACCTGCGTTATC 269
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 268 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 209
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAAT-GGTCGGTGAAGACCAGTTCCGCTTCATTG 185
||||| ||||||||| | |||| || | || | || || |||| ||||| ||||||
Sbjct 208 AGCCCGTAAAGGACCTTGAAGCCAAAAGGTGGGACTGTTAATCCCAGCTCCGCCTCATTG 149
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| |||||||||| ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 148 AATAAGTAAAAAGACGATAAGGGTAGTGGTATTTCAACGGCGCCGAA---GCTCCCACTT 92
Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
|||||||||| | | ||| |||||||| ||| ||||||||||||||||||||||||||
Sbjct 91 ATTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 32
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCC 337
| || |||||||| |||||||||||||||
Sbjct 31 C-TTAGTAGCTGATTCTGCCAAGCCCGTTCCC 1
>seq18246
Length=1389
Score = 336 bits (372), Expect = 7e-90
Identities = 243/279 (87%), Gaps = 4/279 (1%)
Strand=Plus/Minus
Query 21 GAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTG 80
||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 276 GAGATTTCTGTTCTCGATGAGTCCCCCTTAGGACACCTGCGTTATCTTTTAACAGATGTG 217
Query 81 CCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAGGAC 140
||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||
Sbjct 216 CCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATCAGCCCGTAAAGGAC 157
Query 141 CTTAACGCCAGAAAAT-GGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaa 199
||| | |||| || | || | || || |||| ||||| ||||||| |||||||||| |
Sbjct 156 CTTGAAGCCAAAAGGTGGGACTGTTAATCCCAGCTCCGCCTCATTGAATAAGTAAAAAGA 97
Query 200 CGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTC 259
|||||||||||||||||||||| |||||||| |||||||||||||||||||| |
Sbjct 96 CGATAAGGGTAGTGGTATTTCAACGGCGCCGAA---GCTCCCACTTATTCTACACCCCCT 40
Query 260 AAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
| ||| |||||||| ||| |||||||||||||||||||
Sbjct 39 ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACA 1
>seq18320
Length=554
Score = 313 bits (346), Expect = 8e-83
Identities = 272/315 (86%), Gaps = 27/315 (9%)
Strand=Plus/Minus
Query 195 aaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACAC 254
||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 526 AAAGACGATAAGGGTAGTGGTATTTCAACGGCGCCGAA---GCTCCCACTTATTCTACAC 470
Query 255 CTCTCAAGTCATTTC-ACAAAGTCGGACTA-GAGTCAAGCTCAACA-GGGTC-TTCTTT- 309
| | | ||| |||| |||| ||| |||| ||||||||||||||| ||||| ||||||
Sbjct 469 CCCCTATGTCTTTTCTACAATGTCAAACTAAGAGTCAAGCTCAACAAGGGTCGTTCTTTT 410
Query 310 CCCCG--CTGATTCC-GCCAA-GCCCGTTCCCTT--GGC-TGTGGTTTCG-CTAGATAGT 361
||||| ||||||| ||||| |||||||||| | ||| |||||||||| |||||||||
Sbjct 409 CCCCGTCCTGATTCTTGCCAACGCCCGTTCCCCTTCGGCGTGTGGTTTCGTCTAGATAGT 350
Query 362 AGATAGGGAC-AGTGGGAA-TCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 349 AGATAGGGACGAGTGGGAAGTCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 290
Query 420 AGGCATTTGG-CTACCTTAAGAGAGTCATAGTTACTCCCGCCGT----TTACCCGCG--C 472
|||||||||| |||||||||||||||||||||||||||| |||| |||||||||
Sbjct 289 AGGCATTTGGTCTACCTTAAGAGAGTCATAGTTACTCCC-CCGTTCCGTTACCCGCGTCG 231
Query 473 TTGGTTG-AATTTCT 486
||||| | |||||||
Sbjct 230 TTGGTAGTAATTTCT 216
>seq18243
Length=1514
Score = 280 bits (310), Expect = 5e-73
Identities = 168/174 (97%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 280 ACTAGAGTCAA-GCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 174 ACTAGAGTCAAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCT 115
Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 114 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 55
Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGG-CTACCTTAAGAGAGTCATAGTT 451
||||||||||||||||||||||||||||||| || || |||||||||||||||
Sbjct 54 CGCGTCACTAATTAGATGACGAGGCATTTGGAGTAGCTGAAGAGAGTCATAGTT 1
>seq18257
Length=977
Score = 221 bits (244), Expect = 4e-55
Identities = 124/125 (99%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 901
Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACT 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 900 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACT 841
Query 539 TTCTG 543
|||||
Sbjct 840 TTCTG 836
>seq18236
Length=7792
Score = 203 bits (224), Expect = 1e-49
Identities = 114/115 (99%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 7788 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTT 7729
Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 394
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7728 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 7674
Score = 113 bits (124), Expect = 1e-22
Identities = 64/65 (98%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 65 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTG 6
Query 345 TGGTT 349
|||||
Sbjct 5 TGGTT 1
>seq18254
Length=1265
Score = 138 bits (152), Expect = 4e-30
Identities = 122/149 (82%), Gaps = 5/149 (3%)
Strand=Plus/Minus
Query 111 GTCATCAACCCGGATCGGCCCGCGAAGGACCTTAACGCCAGAAAATGGT-CGGTGAAGAC 169
||| |||||||||||| ||||| ||||||||| | |||| || ||| | || || |
Sbjct 1253 GTCTTCAACCCGGATCTGCCCGTAAAGGACCTTGAAGCCAAAAGGTGGGACTGTTAATCC 1194
Query 170 CAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC 229
||| ||||| ||||||| ||||||||| | |||||||||||||||||||||| |||||
Sbjct 1193 CAGCTCCGCCTCATTGAATAAGTAAAAGA-CGATAAGGGTAGTGGTATTTCAACGGCGCC 1135
Query 230 GAAACGGCTCCCACTTATTCTACACCTCT 258
||| |||||||||||||||||||| ||
Sbjct 1134 GAA---GCTCCCACTTATTCTACACCCCT 1109
>seq18301
Length=714
Score = 131 bits (144), Expect = 5e-28
Identities = 123/153 (80%), Gaps = 6/153 (4%)
Strand=Plus/Minus
Query 119 CCCGGATCG-GCCCGCGAAGGACCTTAACGCCAGAAAATGGT-CGGTGAAGACCAGTTCC 176
||||||| ||||| ||||||||| | |||| || ||| | || || |||| |||
Sbjct 694 CCCGGATMATGCCCGTAAAGGACCTTGAAGCCAAAAGGTGGGACTGTTAATCCCAGCTCC 635
Query 177 GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG 236
|| ||||||| ||||||||| | |||||||||||||||||||||| |||||||| |
Sbjct 634 GCCTCATTGAATAAGTAAAAGA-CGATAAGGGTAGTGGTATTTCAACGGCGCCGAA---G 579
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTC 269
||||||||||||||||||| ||| |||| ||||
Sbjct 578 CTCCCACTTATTCTACACCCCTCTAGTCGTTTC 546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634890898144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |