Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq13619 205 7e-48 seq15036 192 5e-44 seq13613 181 8e-41 seq13643 98.7 8e-16 >seq13619 Length=8937 Score = 205 bits (226), Expect = 7e-48 Identities = 373/543 (69%), Gaps = 5/543 (1%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || |||||||| ||||| | ||||||| | ||| | Sbjct 109 ATTTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTTTGGACCGCGGAGGAGATGGATCTT 168 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | || ||| | ||| | | ||| || ||| | || ||||| Sbjct 169 TCCAAGGATCTCCACGATTGGCACAACCGTCTCAACGA-CGATGAGCGCCACTTCATCTC 227 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||| | || ||||| ||||| || || ||||| || || ||||| | | ||||| Sbjct 228 TCATGTCCTCGCCTTCTTCGCCGCCTCAGATGGTATTGTGAACGAGAACCTCGTCGAACG 287 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| | | ||||| || | | ||||| || || ||||||||||||||||| || Sbjct 288 TTTCTCCAACGAGGTCCAGGCCGCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 347 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| || | ||| | |||||||| || ||||||| || | Sbjct 348 GGAGAACATCCACTCCGAAACCTACTCCCTCCTCATCGACACCTACATCAAAGACCCCAA 407 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 | | ||||| | | ||| |||| || || || || || | ||| ||| || || Sbjct 408 GCAGCGTGAGCACCTCTTCGATGCAATTGAAACCATCCCCTGCATCAAGAAGAAGGCCGA 467 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATT 61502 ||||| || |||||| | ||| | |||| || | || || | | || || Sbjct 468 CTGGGCACTCCGCTGGATCTCGGATACGGAGTCTACTTTCGCGGAGCGCCTTGTCGCCTT 527 Query 61503 TGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAA 61562 || | |||||||||| | || ||| ||| || ||||| ||||||| ||| | ||||| Sbjct 528 CGCCGCGGTCGAGGGTATCTTCTTCTCTGGGTCCTTTGCGTCAATCTTCTGGCTCAAGAA 587 Query 61563 ACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCAT 61622 || || | ||||||||||| || ||| || ||| | || || || |||||||| || Sbjct 588 GCGCGGCTTGATGCCCGGTCTCACGTTCTCGAACGAGCTCATCTCGCGTGACGAGGGTAT 647 Query 61623 GCA 61625 ||| Sbjct 648 GCA 650 >seq15036 Length=18609 Score = 192 bits (212), Expect = 5e-44 Identities = 313/448 (70%), Gaps = 2/448 (0%) Strand=Plus/Plus Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187 ||||||||||| | |||| | || |||||||||| || ||||| | ||| |||| | Sbjct 11377 GCATCCTTGTAGAGCATGAAAGGGCCCCCGGTCTCAATCTGAGACTCCAGGATAGCGTAC 11436 Query 66188 CAAAGAGCGCGTGCCTTCACCGTACGTACC-GCCCTACCTTTGCGTTCGTAATGTTCGTA 66246 ||||| | |||| | || | | | || | ||| | || ||||| || ||||| Sbjct 11437 CAAAGCTTCTGAGCCTCGATGGT-CTTCCGTGCACGACCCTCACGCTCGTACTGCTCGTA 11495 Query 66247 GAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACAT 66306 ||| ||||| |||||||| || ||| || | || || || ||||| | Sbjct 11496 AAGGGCCTCGAACTCGTCACCCCAAACCTCGTGGAGGCCAGGTGCCTCGTTGGGACAGAA 11555 Query 66307 CAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGC 66366 ||| ||||| | ||| || || || || ||| || ||||| || ||||| | ||| Sbjct 11556 CAGTGACCATTTGCCACCCGCCTCGACGCGCTTCATGAACAGATCGGGGATCCACAAGGC 11615 Query 66367 GTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAA 66426 ||||||||| || || || || |||||| ||||||| || ||||| | ||||| ||| Sbjct 11616 GTAGAAGAGGTCACGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGATGAA 11675 Query 66427 CTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCC 66486 ||| || | ||||||||||||||| || |||||||| ||||| | || ||||||| Sbjct 11676 CTCGAACACGTCGGCATGCCATGGCTCGAGGTAGATAGCGAAGGCACCAGGACGTTTGTT 11735 Query 66487 GCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCC 66546 |||||| ||||| || || || ||| || | | ||||| | ||| || |||| || Sbjct 11736 GCCACCCTGGTCCACATACCGCGCGGTGGAGTCGTATACACGGAGCATAGGAACGATGCC 11795 Query 66547 GTTAGATTTGCCATTGGTGCCGTCGATG 66574 ||| || | |||||||| || ||||| Sbjct 11796 GTTCGAGTAACCATTGGTTCCCGCGATG 11823 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 ||||||||||| | || ||||||||| |||||||||| ||| ||| || ||| || Sbjct 10655 TGGAACTCGCCCGCGAGCACACGACGGGTATAGATGTTGCTGGTGTAGGGCTCGAAGCAT 10714 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| || | || || || || |||||||| ||||| | | |||| Sbjct 10715 TCGTTGTTGCCCAGAATCTGCGACGTGGAGGCTGTAGGCATGGGCGCGACGAGGAGTGAG 10774 Query 65552 TTTCGCAATCCGT 65564 || | ||| |||| Sbjct 10775 TTCCTCAAGCCGT 10787 Score = 82.4 bits (90), Expect = 6e-11 Identities = 211/319 (66%), Gaps = 2/319 (1%) Strand=Plus/Plus Query 66605 TTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAAT 66664 || ||||| || |||||||| ||||| ||| || || || | ||| | | Sbjct 11907 TTGAGACCGATGCCACCGGCTGTCTTGCTGATCATGGCGCAGTCCTTGAGCGTCTCGTAG 11966 Query 66665 ATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTG 66724 || || || ||||| || |||| ||| | |||| ||||||| || | || || ||| Sbjct 11967 ATACCCTCTATGGAATCGTCCTTCATGCAAACGAGGAAGCATGAGCTCATCTGAGGGTTG 12026 Query 66725 GGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAA 66784 || || | || |||||||||||| | || || || |||||| | |||||| Sbjct 12027 GGAGTACCAGCGTTGAAGAGGGTGGGCGATGCATGGGTGAAGTAACGCTCGGACATGAGG 12086 Query 66785 TTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCAT 66843 |||||||| | | || || |||| | ||||| || |||| || ||| ||||| Sbjct 12087 TTGTACGTTTGCAGAACGCGTTCGATGTCGGCCCCATGGATGCCGACGGCGACA-CGCAT 12145 Query 66844 CAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTC 66903 ||||| | ||| ||||| || ||| |||| |||| | || | ||| || | || Sbjct 12146 GAGGAGATGTTGTGGCCGCTCTGCCACGCGATTGTTGAGCTTCAACAGGTAAGACCTCTC 12205 Query 66904 CAGGGTCTTGATACCAAAG 66922 || ||||||| || ||| Sbjct 12206 TAGTGTCTTGAACCCGAAG 12224 >seq13613 Length=18521 Score = 181 bits (200), Expect = 8e-41 Identities = 298/425 (70%), Gaps = 6/425 (1%) Strand=Plus/Minus Query 61205 ATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTT 61264 ||||| | || ||||| ||||| || ||||| || ||||| |||||| | | || || | Sbjct 17659 ATGTGCTCGCCTTCTTCGCCGCCTCAGACGGCATTGTCAACGAGAATCTGGTCGAGCGGT 17600 Query 61265 TCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGG 61324 | | | ||||| || | | ||||| || || || |||||||| ||||| || | Sbjct 17599 TTTCTAACGAGGTCCAGGCCGCTGAGGCACGATGCTTTTACGGCTTTCAGATCATGATCG 17540 Query 61325 AGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGG 61384 | || || |||||||||| ||| | | ||||||||||| || ||||| || | | | Sbjct 17539 AAAACGTTCACTCGGAGACCTACTCTCTCCTCATCGATACTTATATCAGAGATCCCGACG 17480 Query 61385 AACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGAT 61443 |||| || | | ||| | || ||||| || ||||| | ||| ||| || || Sbjct 17479 AACG-GACCTTCCTCTTCGACGCAATCGAAACCATACCCTGTATCAAGAAGAAGGCCGAC 17421 Query 61444 TGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTT--GGTGAACGATTGCTGGCAT 61501 ||||| || |||||| | | || || | | | | | ||| ||| || |||| | Sbjct 17420 TGGGCATTGCGTTGGATAGC--GGACGACCAGTCCGTGTTCGCTGAGCGACTGGTGGCGT 17363 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 |||||| || ||||| |||| ||| ||| | |||||| | ||||| ||| | |||| Sbjct 17362 TTGCGGCCGTGGAGGGCATATTCTTCTCTGGGTGTTTTGCCTCCATCTTCTGGCTCAAGA 17303 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | ||||| || |||||||| ||||| ||| || ||| | ||||| ||||||||||||| Sbjct 17302 AGCGTGGGCTCATGCCCGGCCTGACGTTCTCAAACGAGCTCATATCGCGCGACGAGGGCA 17243 Query 61622 TGCAT 61626 ||||| Sbjct 17242 TGCAT 17238 Score = 93.3 bits (102), Expect = 3e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 61741 GCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTA-ATGTCGCAGTATATTGAATT 61799 ||| | || || || |||||||| | |||| ||||| |||| || || || || || Sbjct 17072 GCTCTCCCTGTGTCGCTCATCGGTCTCAATTC-GGACTCGATGTGCCAATACATCGAGTT 17014 Query 61800 TGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCC 61859 ||| || ||| | ||| | || | | | || | || | ||| || | || ||||| Sbjct 17013 TGTAGCGGACAGGCTGCTTGTTGCTCTCGGAAATGAGAAGCACTACAACTCAAATAACCC 16954 Query 61860 ATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 ||||| |||||||||||||||||||| || || ||||| || || ||||||||||| || Sbjct 16953 GTTTGACTTCATGGACATGATTTCGCTTGAGGGGAAGACCAACTTCTTCGAGAAACGGGT 16894 >seq13643 Length=1514 Score = 98.7 bits (108), Expect = 8e-16 Identities = 125/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 61205 ATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTT 61264 ||||| | || ||||| ||||| || ||||| || ||||| |||||| | | || || | Sbjct 234 ATGTGCTCGCCTTCTTCGCCGCCTCAGACGGCATTGTCAACGAGAATCTGGTCGAGCGGT 175 Query 61265 TCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGG 61324 | | | ||||| || | | ||||| || || || |||||||||||||| || | Sbjct 174 TTTCTAACGAGGTCCAGGCCGCTGAGGCACGATGCTTTTACGGCTTCCAGATCATGATCG 115 Query 61325 AGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 | || |||||||| |||| ||| | | |||||||| || |||||||| || Sbjct 114 AAAACGTCCACTCCGAGACATACTCTCTCCTCATCGACACTTACATCAGAGA 63 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397476408159920