Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq25 405 9e-111 seq21 91.5 3e-16 >seq25 Length=6558 Score = 405 bits (448), Expect = 9e-111 Identities = 279/313 (89%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||| ||| ||| ||| ||| || ||| |||||||||||||||||||| |||||| Sbjct 5866 GTCTGGCTGGGTCTTACCTCTTGGTGAGCCGGCATGCCCTTCACTGGGTGTGTCGGGGAA 5807 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||| Sbjct 5806 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCTGAATACATT 5747 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 5746 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 5687 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | |||||||| ||| |||||||||||||||||| Sbjct 5686 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGA 5627 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 |||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 5626 TTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 5568 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 5567 CGAAGGTTAGGGG 5555 >seq21 Length=14874 Score = 91.5 bits (100), Expect = 3e-16 Identities = 74/86 (86%), Gaps = 3/86 (3%) Strand=Plus/Minus Query 233 TGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTC 292 ||||||||| |||||| |||||||||||||||||||||| || ||||||||| |||| Sbjct 14874 TGAAATTCTCGGATTTCC-GAAGACTAACTACTGCGAAAGCATTTGCCAAGGATG-TTTC 14817 Query 293 ATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||| || |||| |||||||| Sbjct 14816 ATTAATCA-AGATCGAAGGTTAGGGG 14792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198572288