Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq25 360 3e-97 seq21 360 3e-97 >seq25 Length=6558 Score = 360 bits (398), Expect = 3e-97 Identities = 234/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5053 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 5112 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 5113 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 5172 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 5173 ACCAGCAAAAGCCGGCCTGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 5232 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 5233 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 5292 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 5293 AGAGCTATCAATCTGTC 5309 >seq21 Length=14874 Score = 360 bits (398), Expect = 3e-97 Identities = 234/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14291 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 14350 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 14351 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 14410 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 14411 ACCAGCAAAAGCCGGCCTGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 14470 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 14471 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 14530 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 14531 AGAGCTATCAATCTGTC 14547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798795836