Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq25 462 4e-128 seq21 462 4e-128 seq48 363 3e-98 >seq25 Length=6558 Score = 462 bits (512), Expect = 4e-128 Identities = 261/264 (99%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 242 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 301 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 302 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 361 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 362 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 421 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 422 TGTGGTAACTTTTCTGGCACCTCTAGCCTCGAATTCCGAGGGACTAAAGGATCGATAGGC 481 Query 272 CACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||| Sbjct 482 CACACTTTCATGGTTTGTATTCAC 505 >seq21 Length=14874 Score = 462 bits (512), Expect = 4e-128 Identities = 261/264 (99%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 9658 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 9717 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9718 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 9777 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9778 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 9837 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 9838 TGTGGTAACTTTTCTGGCACCTCTAGCCTCGAATTCCGAGGGACTAAAGGATCGATAGGC 9897 Query 272 CACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||| Sbjct 9898 CACACTTTCATGGTTTGTATTCAC 9921 Score = 127 bits (140), Expect = 3e-27 Identities = 73/75 (97%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 221 TTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 2003 TTTTCTGGCACCTCTAGCCTCGAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTC 1944 Query 281 ATGGTTTGTATTCAC 295 ||||||||||||||| Sbjct 1943 ATGGTTTGTATTCAC 1929 >seq48 Length=3891 Score = 363 bits (402), Expect = 3e-98 Identities = 227/243 (93%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 242 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCATGTTCCCTAT 183 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||| ||||||| || |||||| ||| ||||||||||||||||||||||||| ||| Sbjct 182 TAGTGGGTAAACAATCTAATGCTTACTGAAATCTGCTTCGGTATGATAGGAAGAGCTGAC 123 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 122 ATTGAAGGATCAAAAAGCAACATCGCTATGAATGCTTGGCTGCCACAAGCCAGTTATCCC 63 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 ||||||||| ||||||||||||||||||| |||| ||||||||||||||| ||||||| Sbjct 62 TGTGGTAAC-TTTCTGGCACCTCTAGCCTTGAATTCTGAGGGACTAAAGGATTGATAGGC 4 Query 272 CAC 274 ||| Sbjct 3 CAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854398667136