Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq25 780 0.0 seq21 780 0.0 >seq25 Length=6558 Score = 780 bits (864), Expect = 0.0 Identities = 497/538 (92%), Gaps = 4/538 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 537 CTTTTGTTCTACTCGAGATTTCTGTTCTCGATGAGTCCCCCTTAGGACACCTGCGTTATC 596 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 597 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 656 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGT-CGGTGAAGACCAGTTCCGCTTCATTG 185 ||||| ||||||||| | |||| || ||| | || || |||| ||||| |||||| Sbjct 657 AGCCCGTAAAGGACCTTGAAGCCAAAAGGTGGGACTGTTAATCCCAGCTCCGCCTCATTG 716 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 | |||||||||| ||||||||||||||||||||||| |||||||| |||||||||| Sbjct 717 AATAAGTAAAAAGACGATAAGGGTAGTGGTATTTCAACGGCGCCGAA---GCTCCCACTT 773 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 |||||||||| | | ||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 774 ATTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 833 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 834 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 893 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 894 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 953 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 954 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 1013 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1014 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 1071 >seq21 Length=14874 Score = 780 bits (864), Expect = 0.0 Identities = 497/538 (92%), Gaps = 4/538 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1897 CTTTTGTTCTACTCGAGATTTCTGTTCTCGATGAGTCCCCCTTAGGACACCTGCGTTATC 1838 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1837 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 1778 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGT-CGGTGAAGACCAGTTCCGCTTCATTG 185 ||||| ||||||||| | |||| || ||| | || || |||| ||||| |||||| Sbjct 1777 AGCCCGTAAAGGACCTTGAAGCCAAAAGGTGGGACTGTTAATCCCAGCTCCGCCTCATTG 1718 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 | |||||||||| ||||||||||||||||||||||| |||||||| |||||||||| Sbjct 1717 AATAAGTAAAAAGACGATAAGGGTAGTGGTATTTCAACGGCGCCGAA---GCTCCCACTT 1661 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 |||||||||| | | ||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 1660 ATTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 1601 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1600 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 1541 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1540 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 1481 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1480 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 1421 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1420 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 1363 Score = 235 bits (260), Expect = 2e-59 Identities = 168/192 (88%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 9953 CTTTTGTTCTACTCGAGATTTCTGTTCTCGATGAGTCCCCCTTAGGACACCTGCGTTATC 10012 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 10013 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 10072 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAAT-GGTCGGTGAAGACCAGTTCCGCTTCATTG 185 ||||| ||||||||| | |||| || | || | || || |||| ||||| |||||| Sbjct 10073 AGCCCGTAAAGGACCTTGAAGCCAAAAGGTGGGACTGTTAATCCCAGCTCCGCCTCATTG 10132 Query 186 ATTAAGTaaaaa 197 | |||||||||| Sbjct 10133 AATAAGTAAAAA 10144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197449088