Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4 212 5e-50 seq2 203 3e-47 >seq4 Length=2972551 Score = 212 bits (234), Expect = 5e-50 Identities = 313/441 (71%), Gaps = 2/441 (0%) Strand=Plus/Plus Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187 |||||||| || | |||| | ||| || ||||| | ||||| ||| | |||||||| | Sbjct 1423385 GCATCCTTATAGAGCATGAAAGGACCACCAGTCTCGATTTGGGCCTCCAGGATGGCGTAC 1423444 Query 66188 CAAAGAGCGCGTGCCTTCACCGTACGTACC-GCCCTACCTTTGCGTTCGTAATGTTCGTA 66246 ||||| | |||| | || | | | || | ||| | ||| ||||| || ||||| Sbjct 1423445 CAAAGCTTCTGAGCCTCGATAGT-CTTCCGTGCGCGACCCTCGCGCTCGTACTGCTCGTA 1423503 Query 66247 GAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACAT 66306 ||| || || |||||||| |||||| |||| || | || ||| || | Sbjct 1423504 GAGTGCCTCAAACTCATCACCCCAGACTTCGTGGAGACCAGGTGCTTCGTTTGGGCAGAA 1423563 Query 66307 CAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGC 66366 || ||||| | ||| | || || || ||| || ||||| || ||||| || || Sbjct 1423564 GAGAGACCATTTGCCACCAGACTCGACGCGCTTCATGAACAGATCGGGGATCCAAAGCGC 1423623 Query 66367 GTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAA 66426 ||||||||| || || ||||| |||||| ||||||| || ||||||| ||||| ||| Sbjct 1423624 GTAGAAGAGGTCACGGGCTCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGATGAA 1423683 Query 66427 CTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCC 66486 ||| ||||||||||| ||||| ||||| |||||||||||||||| ||| || ||| Sbjct 1423684 CTCGAAGATGTCGGCGTGCCAGGGTTCGAGGTAGATGGCGAACGCGCCAGGGCGCTTGTT 1423743 Query 66487 GCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCC 66546 ||||||||| ||||| || || ||| | || | ||||||| | ||| || || | || Sbjct 1423744 GCCACCTTGATCGACATACCGCGCGGTAGCGTCGTAGACACGGAGCATAGGAACAATTCC 1423803 Query 66547 GTTAGATTTGCCATTGGTGCC 66567 ||| || | || |||||||| Sbjct 1423804 GTTGGAGTAACCGTTGGTGCC 1423824 >seq2 Length=3722621 Score = 203 bits (224), Expect = 3e-47 Identities = 390/572 (68%), Gaps = 11/572 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || ||||| |||||||| | |||||| | ||| | Sbjct 2461297 ATCTGGCAAATGTACAAGAAGGCAGAGGCTTCTTTCTGGACTGCTGAGGAGATGGATCTT 2461238 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | |||||||| | | | | | | || ||| | |||||| | Sbjct 2461237 TCCAAGGATCTCCATGACTGGAACAACAGGCTCAACAA-CGATGAGCGCCATTTCGTCTC 2461179 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||| | || ||||| ||||| |||||||| |||||||| ||||| | | || || Sbjct 2461178 CCATGTCCTTGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTTGTCGAGCG 2461119 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| | | ||||| || | | ||||| || ||||||||||||||||| || || Sbjct 2461118 TTTCTCCAACGAGGTCCAGGCCGCCGAGGCCCGCTGTTTCTACGGCTTCCAAATCATGAT 2461059 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| |||| || |||| ||| | ||||||||||| ||||||| ||| | Sbjct 2461058 GGAGAACATCCATTCCGAGACCTACTCCCTCCTCATCGATACCTACATCAAGGACCCCAG 2460999 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 | | ||||| | || | |||||||||||||| || | ||| ||| || || Sbjct 2460998 GCAGCGTGAGTACCTCTTTGACGCCATCGAGACGATCCCTTGCATCAAGAAGAAGGCCGA 2460939 Query 61443 TTGGGCCTTCAATTGGATCAC---CAGTACAACGGCTACATTTGGTGAACGATTGCTGGC 61499 |||||| || |||||| | || | | ||| || | ||||| | | || Sbjct 2460938 CTGGGCCCTCCGCTGGATCTCTGACAAGAATTCCGCT---TTCGCGGAACGCCTTGTCGC 2460882 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 || || | ||||||||| | || ||| ||| || || || | ||||| ||| | || Sbjct 2460881 CTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCGTCTATCTTCTGGCTCAA 2460822 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||| || || | ||||||||||| || ||| || ||| | || || ||||||||||| Sbjct 2460821 GAAGCGCGGCTTGATGCCCGGTCTCACTTTCTCGAACGAGCTCATCTCGCGCGACGAGGG 2460762 Query 61620 CATGCATTGTGATTTTGCTGTTTTGCTATTCA 61651 ||||| || ||||| ||||| |||| Sbjct 2460761 TATGCACACCGACTTTGCGTGCTTGCTCTTCA 2460730 Score = 159 bits (176), Expect = 3e-34 Identities = 289/418 (69%), Gaps = 6/418 (1%) Strand=Plus/Plus Query 61211 TGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGC 61270 |||| || ||||| || ||||||||||||||||| ||||| | | || || || | Sbjct 2462800 TGGCCTTTTTTGCGGCCTCGGACGGTATCGTCAACGAGAACCTCGTCGAGCGGTTTTCTA 2462859 Query 61271 AGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATG 61330 | ||||| || | | |||||||| || ||||| ||||||||||| || || || | Sbjct 2462860 ACGAGGTTCAGGCCGCCGAGGCGCGATGCTTCTATGGCTTCCAGATCATGATCGAAAACG 2462919 Query 61331 TCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTG 61390 ||||||| |||| ||| ||||||| || || ||||||||||| | | || | | Sbjct 2462920 TCCACTCCGAGACCTACTCCCTTCTCATTGACACTTACATCAGGGACCCAGACGA--GAG 2462977 Query 61391 AACGAT--TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGC 61448 ||| | | ||| | ||||||||||| ||||| | ||| ||| || |||||||| Sbjct 2462978 GACGTTCCTCTTCGACGCCATCGAGACTATACCCTGCATCAAGAAGAAGGCCGATTGGGC 2463037 Query 61449 CTTCAATTGGATCAC-CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGG 61507 || ||||| | | || | | | || | ||| || || | || || || | Sbjct 2463038 ATTACGCTGGATAGCTGATGACCA-GTCCGTGTTCGCTGAGCGGCTGGTCGCCTTCGCCG 2463096 Query 61508 TGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTG 61567 || ||||| |||| ||| || | |||||| ||||||| ||| | ||||| |||| Sbjct 2463097 CTGTAGAGGGCATATTCTTCTCCGGGTGTTTTGCCTCAATCTTCTGGCTCAAGAAGCGTG 2463156 Query 61568 GACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCA 61625 | || |||||||| |||| ||| || ||| | || || || || ||||||||||| Sbjct 2463157 GGCTGATGCCCGGCTTGACGTTCTCGAACGAGCTCATCTCGCGTGATGAGGGCATGCA 2463214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567244123840