Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01]
63 sequences; 27,756,302 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq38 354 2e-95
seq23 273 7e-71
seq5 87.8 5e-15
>seq38
Length=18728
Score = 354 bits (392), Expect = 2e-95
Identities = 235/256 (92%), Gaps = 5/256 (2%)
Strand=Plus/Minus
Query 101 CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGT 160
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 18728 CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGT 18669
Query 161 TACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATT 220
||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 18668 TACCCGTTGCAACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATT 18609
Query 221 TGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG 280
|||||||| |||| ||||| |||||||||| |||||| |||||||||||| ||||||||
Sbjct 18608 TGAATGAAGCATCACCGGCACAAGGCCATGTGATTCGAGAAGTTATTATGATTCACCAAG 18549
Query 281 GAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGG-TT 339
| | |||||||| ||||| |||||||||||||||||||||||||||||||| |||| ||
Sbjct 18548 G-GACCCGAAGG--GTTGG-TTTTTATCTAATAAATACACCCCTTCCGAAGTTGGGGCTT 18493
Query 340 TTTAGCATGTATTAGC 355
|| |||||||| ||||
Sbjct 18492 TTAAGCATGTAGTAGC 18477
>seq23
Length=563827
Score = 273 bits (302), Expect = 7e-71
Identities = 168/179 (94%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||| |||||| | || |||||| ||| ||||||||||||||||||
Sbjct 179 GTACTCATTCCAATTATAAGACCTATAAAAGCCCTATATTGTTATTTATTGTCACTACCT 120
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 119 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 60
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 59 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGT 1
>seq5
Length=1308857
Score = 87.8 bits (96), Expect = 5e-15
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 338 TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAA 397
|||| ||||||||||||||||||||| ||| | |||||||||| || ||| ||| | |||
Sbjct 133649 TTTTAAGCATGTATTAGCTCTAGAATCACCTCAGTTATCCATGCAGCAAGATACCAACAA 133590
Query 398 ATAAACGATAACT 410
|||||| ||||||
Sbjct 133589 ATAAACTATAACT 133577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510399048448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |