Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq936 320 5e-85 >seq936 Length=2523 Score = 320 bits (354), Expect = 5e-85 Identities = 288/362 (80%), Gaps = 26/362 (7%) Strand=Plus/Minus Query 163 GTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTG 222 ||| |||||||||||||||| ||||| ||| |||||||||||||||| ||| | | ||| Sbjct 1584 GTCGGATTAGCTAGTTGGTAGGGTAAAGGCCTACCAAGGCGACGATCCGTAACTGGTCTG 1525 Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282 ||||| ||||| | |||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 1524 AGAGGATGATCAGTCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAG 1465 Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342 |||||||||||| ||||||||| |||||||||| |||| | |||||||| | || ||||| Sbjct 1464 TGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGG 1405 Query 343 CCTTCGGGTCGTAAAGCTCT---------------GTCCTCA-AG-GAAGA--------T 377 ||||||||||||||||| || | |||| || ||| | | Sbjct 1404 CCTTCGGGTCGTAAAGCACTTTAAGTTGGGAGGAAGGGCTCATAGCGAATACCTGTGAGT 1345 Query 378 AATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437 ||||| ||| || |||| |||||||||| |||||||||||||||||||||||| Sbjct 1344 TTTGACGTTACCAACAGAATAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACG 1285 Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAA 497 |||| || ||||||| |||||||||| |||||||||| | |||||||||| || ||| Sbjct 1284 AAGGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGCGCGTAGGTGGCTTGATAA 1226 Query 498 GT 499 || Sbjct 1225 GT 1224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497580890624