Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq936 399 5e-109 >seq936 Length=2523 Score = 399 bits (442), Expect = 5e-109 Identities = 327/396 (83%), Gaps = 1/396 (0%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||| |||||||||||||||||||||||| |||| || ||||||| || Sbjct 1324 AAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTAATCG 1265 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||||||||||||||| | |||||||||| || ||||| || |||||| | || Sbjct 1264 GAATTACTGGGCGTAAAGCGCGCGTAGGTGGCTTGATAAGTTGGATGTGAAATCCCCGGG 1205 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 ||||||| || ||||| | |||||| ||||||||||| | || || |||||||| Sbjct 1204 CTCAACCTGGGAACTGCATCCAAAACTGTCTGGCTAGAGTGCGGTAGAGGGTAGTGGAAT 1145 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||||||||||||||||||||||||||| | |||||||||||||||||||||| || Sbjct 1144 TTCCAGTGTAGCGGTGAAATGCGTAGATATTGGAAGGAACACCAGTGGCGAAGGCGACTA 1085 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1084 CCTGGACTGACACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 1025 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGC 372 |||||||||||||||||||||||| ||||| || ||| | | || || ||| Sbjct 1024 TGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGATCCTTGAGATCT-TAGTGG 966 Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 |||||| |||||| ||||| || ||||||||||| Sbjct 965 CGCAGCTAACGCATTAAGTTGACCGCCTGGGGAGTA 930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203184647168