Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20]
1,276 sequences; 42,856,078 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq876 150 3e-34
>seq876
Length=3194
Score = 150 bits (166), Expect = 3e-34
Identities = 211/283 (75%), Gaps = 10/283 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| |
Sbjct 2294 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 2237
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| |
Sbjct 2236 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 2177
Query 121 GAACGGGGTGATTCTC-TCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGCCCCGA 178
||| | |||| | ||| |||||| | | | | ||||| |||| | | ||
Sbjct 2176 GAAACGA-TGATGTTGGTCCCGCACATACGACTTGTGTTGAAATAGAGCTTTGCTCGTGA 2118
Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCC-GCGGAAGCGCG-GGGCGCTCAGCTGGCGGAT 236
||| | | || |||| || ||| | |||||| || ||||| | | |||| ||
Sbjct 2117 ACCAAATCTGGTCGGCTG-GGCCGTTCGAGCGGAAATGCTTGGGCGGTTTGTCGGCGTAT 2059
Query 237 TGCAATT-TCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||| ||| ||| || ||| | |||||||||||||||||
Sbjct 2058 TGCAATAATCAT-ATGGGCGGGGGTGAATCCTTTGCAGACGAC 2017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819189873664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |