Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq71 284 2e-74 seq92 277 3e-72 seq126 271 1e-70 >seq71 Length=13857 Score = 284 bits (314), Expect = 2e-74 Identities = 204/231 (88%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||| ||||| |||||||| ||||||||||||||| | Sbjct 3762 GTACAAAGGGCAGGGACGTAATCAACGTGAGCT-GATGACTCACGCTTACTAGGAATT-C 3819 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||||| |||||| Sbjct 3820 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTCACAAGATT 3879 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||||||| ||||| || ||||||||||||||||||| Sbjct 3880 ACCCAGACCTTCCGGCCAAGGTGATTAACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 3939 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3940 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 3990 Score = 284 bits (314), Expect = 2e-74 Identities = 204/231 (88%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||| ||||| |||||||| ||||||||||||||| | Sbjct 13100 GTACAAAGGGCAGGGACGTAATCAACGTGAGCT-GATGACTCACGCTTACTAGGAATT-C 13157 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||||| |||||| Sbjct 13158 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTCACAAGATT 13217 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||||||| ||||| || ||||||||||||||||||| Sbjct 13218 ACCCAGACCTTCCGGCCAAGGTGATTAACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 13277 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13278 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 13328 >seq92 Length=3809 Score = 277 bits (306), Expect = 3e-72 Identities = 203/231 (88%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||| ||||| |||||||| |||||||||||||| | Sbjct 201 GTACAAAGGGCAGGGACGTAATCAACGTGAGCT-GATGACTCA-GCTTACTAGGAATT-C 257 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||||| |||||| Sbjct 258 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTCACAAGATT 317 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||||||| ||||| || ||||||||||||||||||| Sbjct 318 ACCCAGACCTTCCGGCCAAGGTGATTAACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 377 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 378 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 428 >seq126 Length=18628 Score = 271 bits (300), Expect = 1e-70 Identities = 202/231 (87%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||| ||||| |||||||| ||||||||||||||| | Sbjct 5384 GTACAAAGGGCAGGGACGTAATCAACGTGAGCT-GATGACTCACGCTTACTAGGAATT-C 5441 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||||| |||||| Sbjct 5442 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTCACAAGATT 5501 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||||||| ||||| || ||||||||||||||||||| Sbjct 5502 ACCCAGACCTTCCGGCCAAGGTGATTAACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 5561 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct 5562 GCCCAGAACATCTAAGGGCATCAAAGA-CTGTTATTGCCTCAAACTTCCGT 5611 Score = 244 bits (270), Expect = 2e-62 Identities = 198/231 (86%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| |||| ||||| |||||| ||||| |||||||| |||||||||| | ||| Sbjct 14685 GTACAAAGG-CAGG-ACGTAATCAACGTGAGCT-GATGACTCACGCTTACTAGAA--TTC 14739 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||| | ||||| ||||| |||||| Sbjct 14740 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCC-AGCACGACAGGGTTTCACAAGATT 14798 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||||||| ||||| || ||||||||||||||||||| Sbjct 14799 ACCCAGACCTTCCGGCCAAGGTGATTAACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 14858 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 14859 GCCCAGAACATCTAA-GGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 14908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999074805