Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq126 158 7e-37 seq71 158 7e-37 seq92 154 8e-36 >seq126 Length=18628 Score = 158 bits (174), Expect = 7e-37 Identities = 105/117 (90%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | |||||| Sbjct 5911 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGTTTGAGGTCGCCC 5970 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 5971 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 6027 Score = 140 bits (154), Expect = 2e-31 Identities = 102/116 (88%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCG 61 ||||||||||||| ||||||||||||||||| |||||| || || | | ||||||| Sbjct 15205 AACCCAAAGACTT-GATTTCTCGTAAGGTGC-GAGCGACACATAAGTTTGAGGTCGCCCG 15262 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 15263 ATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 15318 >seq71 Length=13857 Score = 158 bits (174), Expect = 7e-37 Identities = 105/117 (90%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | |||||| Sbjct 13629 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGTTTGAGGTCGCCC 13688 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 13689 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 13745 Score = 141 bits (156), Expect = 5e-32 Identities = 102/117 (87%), Gaps = 3/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||| ||||||||||| || || | | |||||| Sbjct 4286 GAACCCAAAGACTTTGATTTCTCGT---GTGCCGAGCGACACATAAGTTTGAGGTCGCCC 4342 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 4343 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 4399 >seq92 Length=3809 Score = 154 bits (170), Expect = 8e-36 Identities = 105/117 (90%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | |||||| Sbjct 727 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGTTTGAGGTCGCCC 786 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 787 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGT-TTCGA 842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399668530