Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq126 399 4e-109 seq92 399 4e-109 seq71 399 4e-109 >seq126 Length=18628 Score = 399 bits (442), Expect = 4e-109 Identities = 278/313 (89%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||||||| ||| ||| ||| || ||| ||||||||| |||||||||| |||||| Sbjct 6340 GTCTGGCCGGGTCTTACCTCTTGGTGAGCCGGCATGCCCTTTACTGGGTGTGTCGGGGAA 6281 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 6280 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATACATT 6221 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 6220 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 6161 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 6160 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCGGTCGTCAGAGGTGAAATTCTTGGA 6101 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 || | |||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 6100 TTGACCGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 6042 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 6041 CGAAGGTTAGGGG 6029 Score = 365 bits (404), Expect = 8e-99 Identities = 273/313 (87%), Gaps = 8/313 (3%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||||||| ||| ||| ||| || ||| |||||| || ||||||||| |||| Sbjct 15625 GTCTGGCCGGGTCTTACCTCTTGGTGAGCCGGCATGCCTTT-ACTGGGTGTC---GGGAA 15570 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 15569 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGC-CGAATACATT 15511 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 15510 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 15451 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 15450 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCGGTCGTCAGAGGTGAAATTCTTGGA 15391 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 | | |||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 15390 -TGACCGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 15333 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 15332 CGAAGGTTAGGGG 15320 >seq92 Length=3809 Score = 399 bits (442), Expect = 4e-109 Identities = 278/313 (89%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||||||| ||| ||| ||| || ||| ||||||||| |||||||||| |||||| Sbjct 1155 GTCTGGCCGGGTCTTACCTCTTGGTGAGCCGGCATGCCCTTTACTGGGTGTGTCGGGGAA 1096 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 1095 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATACATT 1036 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1035 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 976 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 975 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCGGTCGTCAGAGGTGAAATTCTTGGA 916 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 || | |||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 915 TTGACCGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 857 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 856 CGAAGGTTAGGGG 844 >seq71 Length=13857 Score = 399 bits (442), Expect = 4e-109 Identities = 278/313 (89%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||||||| ||| ||| ||| || ||| ||||||||| |||||||||| |||||| Sbjct 4712 GTCTGGCCGGGTCTTACCTCTTGGTGAGCCGGCATGCCCTTTACTGGGTGTGTCGGGGAA 4653 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 4652 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATACATT 4593 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 4592 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 4533 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 4532 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCGGTCGTCAGAGGTGAAATTCTTGGA 4473 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 || | |||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 4472 TTGACCGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 4414 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 4413 CGAAGGTTAGGGG 4401 Score = 132 bits (146), Expect = 9e-29 Identities = 93/105 (89%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 214 AGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC 273 ||||||| | ||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct 13850 AGTATTCGGTCGTCAGAGGTGAAATTCTTGGATTGACCGAAGACTAACTACTGCGAAAGC 13791 Query 274 GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || |||||||||||||||||||||| ||||||| |||||||| Sbjct 13790 ATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAGGTTAGGGG 13747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198837696