Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq92 356 4e-96 seq71 356 4e-96 seq126 336 3e-90 >seq92 Length=3809 Score = 356 bits (394), Expect = 4e-96 Identities = 233/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 345 ACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 404 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 405 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 464 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 465 ACCAGCAAAAGCCGGCCTGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 524 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 525 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 584 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 585 AGAGCTATCAATCTGTC 601 >seq71 Length=13857 Score = 356 bits (394), Expect = 4e-96 Identities = 233/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3907 ACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3966 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 3967 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 4026 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 4027 ACCAGCAAAAGCCGGCCTGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 4086 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 4087 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 4146 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 4147 AGAGCTATCAATCTGTC 4163 Score = 356 bits (394), Expect = 4e-96 Identities = 233/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13245 ACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 13304 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 13305 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 13364 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 13365 ACCAGCAAAAGCCGGCCTGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 13424 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 13425 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 13484 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 13485 AGAGCTATCAATCTGTC 13501 >seq126 Length=18628 Score = 336 bits (372), Expect = 3e-90 Identities = 231/257 (90%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 5529 ACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCAAAGA 5588 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 | |||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 5589 C-TGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 5647 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || || ||||| |||||||||||||||||||||||||||||||||| Sbjct 5648 ACCAGCAA-AGCCGCCTGG-CTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 5705 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 5706 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 5765 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 5766 AGAGCTATCAATCTGTC 5782 Score = 327 bits (362), Expect = 2e-87 Identities = 230/257 (89%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| | ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 14826 ACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGG-CATCACAGA 14884 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 14885 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 14944 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | | || ||||||| ||||||||||||||||||||||||||| |||||| Sbjct 14945 ACCAGCAAAAC-CGGCCTGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCG-AATTAA 15002 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 15003 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA-AATCATGAA 15061 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 15062 AGAGCTATCAATCTGTC 15078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799019687