Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq92 113 3e-23 seq71 113 3e-23 seq126 102 5e-20 >seq92 Length=3809 Score = 113 bits (124), Expect = 3e-23 Identities = 96/112 (86%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 128 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 183 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| ||||| |||| Sbjct 184 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGTGAGCT 233 >seq71 Length=13857 Score = 113 bits (124), Expect = 3e-23 Identities = 96/112 (86%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 3689 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3744 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| ||||| |||| Sbjct 3745 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGTGAGCT 3794 Score = 113 bits (124), Expect = 3e-23 Identities = 96/112 (86%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 13027 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 13082 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| ||||| |||| Sbjct 13083 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGTGAGCT 13132 >seq126 Length=18628 Score = 102 bits (112), Expect = 5e-20 Identities = 94/112 (84%), Gaps = 8/112 (7%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| |||| ||| | |||||||| | ||| |||||||||||||| || |||||| Sbjct 5313 CCGTT-GCCGC-TCCCCGAAGCCAATCC---AAGACCTCACTAAGCCATT-CAATCGGTA 5366 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| ||||| |||| Sbjct 5367 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGTGAGCT 5416 Score = 96.9 bits (106), Expect = 2e-18 Identities = 94/112 (84%), Gaps = 8/112 (7%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 14612 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 14667 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| ||||||||| |||| ||||||||| ||||| |||| Sbjct 14668 GTA-GCGACGGGCGGTGTGTACAAA-GGCA-GGACGTAAT-CAACGTGAGCT 14715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799641860