Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq126 228 1e-57 seq92 228 1e-57 seq71 228 1e-57 >seq126 Length=18628 Score = 228 bits (252), Expect = 1e-57 Identities = 170/198 (86%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 6166 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 6225 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6226 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 6285 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||||| | || ||||| | |||||||||||||||| | | || | |||||| Sbjct 6286 CGACACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCGGCCAGACAGTAC 6345 Query 179 TCGCCGTGAGGCGGACCA 196 | ||||| |||| ||||| Sbjct 6346 TTGCCGTTAGGCAGACCA 6363 Score = 221 bits (244), Expect = 1e-55 Identities = 169/196 (86%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 15456 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 15515 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15516 ATTC-GGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC- 15573 Query 121 CCGCACACCAATGAAGGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTC 180 | ||| ||| | ||||||| | |||||||||||||||| | | || | ||||||| Sbjct 15574 CGACAC-CCAGTAAAGGCATGCCGGCTCACCAAGAGGTAAGACCCGGCCAGACAGTACTT 15632 Query 181 GCCGTGAGGCGGACCA 196 ||||| |||| ||||| Sbjct 15633 GCCGTTAGGCAGACCA 15648 >seq92 Length=3809 Score = 228 bits (252), Expect = 1e-57 Identities = 170/198 (86%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 981 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 1040 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1041 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 1100 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||||| | || ||||| | |||||||||||||||| | | || | |||||| Sbjct 1101 CGACACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCGGCCAGACAGTAC 1160 Query 179 TCGCCGTGAGGCGGACCA 196 | ||||| |||| ||||| Sbjct 1161 TTGCCGTTAGGCAGACCA 1178 >seq71 Length=13857 Score = 228 bits (252), Expect = 1e-57 Identities = 170/198 (86%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 4538 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 4597 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4598 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 4657 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||||| | || ||||| | |||||||||||||||| | | || | |||||| Sbjct 4658 CGACACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCGGCCAGACAGTAC 4717 Query 179 TCGCCGTGAGGCGGACCA 196 | ||||| |||| ||||| Sbjct 4718 TTGCCGTTAGGCAGACCA 4735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199267718