Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq71 461 1e-127 seq92 453 2e-125 seq126 437 2e-120 >seq71 Length=13857 Score = 461 bits (510), Expect = 1e-127 Identities = 289/310 (93%), Gaps = 1/310 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||| Sbjct 4072 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 4013 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 4012 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 3953 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| Sbjct 3952 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGGGCCAGCGAGTTAATCACCTTGGCC 3893 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 3892 GGAAGGTCTGGGTAATCTTGTGAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 3833 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| | |||||||||||||||| Sbjct 3832 GCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCACGTTGATTACGTCCCT 3773 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 3772 GCCCTTTGTA 3763 Score = 461 bits (510), Expect = 1e-127 Identities = 289/310 (93%), Gaps = 1/310 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||| Sbjct 13410 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 13351 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 13350 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 13291 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| Sbjct 13290 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGGGCCAGCGAGTTAATCACCTTGGCC 13231 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 13230 GGAAGGTCTGGGTAATCTTGTGAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 13171 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| | |||||||||||||||| Sbjct 13170 GCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCACGTTGATTACGTCCCT 13111 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 13110 GCCCTTTGTA 13101 >seq92 Length=3809 Score = 453 bits (502), Expect = 2e-125 Identities = 288/310 (93%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||| Sbjct 510 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 451 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 450 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 391 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| Sbjct 390 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGGGCCAGCGAGTTAATCACCTTGGCC 331 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 330 GGAAGGTCTGGGTAATCTTGTGAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 271 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||| | ||||||||| | |||||||||||||||| Sbjct 270 GCTCTTCAACGAGGAATTCCTAGTAAGC-TGAGTCATCAGCTCACGTTGATTACGTCCCT 212 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 211 GCCCTTTGTA 202 >seq126 Length=18628 Score = 437 bits (484), Expect = 2e-120 Identities = 286/310 (92%), Gaps = 4/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||| ||||||||||| |||||| | ||||||||||||||||| Sbjct 5691 GAACGAGACCTTAACCTGCTTAATAGCCAGGCG-GCTTTG-CTGGTCGCCGGCTTCTTAG 5634 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || ||||||||||||||||||||| ||| |||||||||| Sbjct 5633 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAG-TCTTTGATGCCCTT 5575 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| Sbjct 5574 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGGGCCAGCGAGTTAATCACCTTGGCC 5515 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 5514 GGAAGGTCTGGGTAATCTTGTGAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 5455 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| | |||||||||||||||| Sbjct 5454 GCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCACGTTGATTACGTCCCT 5395 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 5394 GCCCTTTGTA 5385 Score = 412 bits (456), Expect = 7e-113 Identities = 283/310 (91%), Gaps = 7/310 (2%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||| |||||||||||| | |||| | ||||||||||||||||| Sbjct 14989 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGTTTTG-CTGGTCGCCGGCTTCTTAG 14931 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || ||||||||||||||||||||||||||||||||| || Sbjct 14930 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC-TT 14872 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| Sbjct 14871 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGGGCCAGCGAGTTAATCACCTTGGCC 14812 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||| Sbjct 14811 GGAAGGTCTGGGTAATCTTGTGAAACCCTGTCGTGCT-GGGATAGAGCATTGCAATTATT 14753 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||| | ||||||||| | |||||||||||| ||| Sbjct 14752 GCTCTTCAACGAGGAAT-TCTAGTAAGCGTGAGTCATCAGCTCACGTTGATTACGT-CCT 14695 Query 319 GCCCTTTGTA 328 | |||||||| Sbjct 14694 G-CCTTTGTA 14686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947198797056