Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq71 140 5e-31 seq126 134 2e-29 >seq71 Length=13857 Score = 140 bits (154), Expect = 5e-31 Identities = 209/284 (74%), Gaps = 12/284 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 9347 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 9290 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 9289 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 9230 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGCCCCGA 178 ||| | |||| | ||| |||||| ||| | | |||||| |||| | | || Sbjct 9229 GAA-ACGATGATGTTGGTCCCGCACATACGAGTTGTGTTTGAATAGAGCTTTGCTCGTGA 9171 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCC--GCGGAAGCGC-GGGGCGCTCAGCTGGCGGA 235 ||| | ||||| ||| || | | || | |||| || || | | | ||| | Sbjct 9170 ACCAAATCAGGCGGGC--TGGACCTTCCGAGTGGAAATGCTTGGTTGGTTTGTCCGCGAA 9113 Query 236 TTGCAAT-TTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| ||| ||| ||| || ||| | ||||||||||||||||| Sbjct 9112 TTGTAATCATCA-TATGGGCGGGGGTGAATCCTTTGCAGACGAC 9070 >seq126 Length=18628 Score = 134 bits (148), Expect = 2e-29 Identities = 105/123 (85%), Gaps = 3/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| | ||||| |||||| ||||| || | |||| | Sbjct 10956 GTACGAGAGGAACCGTTCA-TTCAGATT--TTGGTATTTGCGCCTGTCCGATCGGGCAAT 10900 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 10899 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 10840 Query 121 GAA 123 ||| Sbjct 10839 GAA 10837 Score = 132 bits (146), Expect = 8e-29 Identities = 209/286 (73%), Gaps = 14/286 (5%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCT--GACCAGGCA 58 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| Sbjct 1614 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCGACGATCGGGCA 1557 Query 59 GTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 || |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 1556 ATGGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGC 1497 Query 119 CAGAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGCCCC 176 |||| | |||| | ||| |||||| ||| | | |||||| |||| | | Sbjct 1496 TAGAA-ACGATGATGTTGGTCCCGCACATACGAGTTGTGTTTGAATAGAGCTTTGCTCGT 1438 Query 177 GAACCTTAGCAGGCCGGCAACGGGCGTCCC--GCGGAAGCGC-GGGGCGCTCAGCTGGCG 233 ||||| | ||||| ||| || | | || | |||| || || | | | ||| Sbjct 1437 GAACCAAATCAGGCGGGC--TGGACCTTCCGAGTGGAAATGCTTGGTTGGTTTGTCCGCG 1380 Query 234 GATTGCAAT-TTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| ||| ||| ||| || ||| | ||||||||||||||||| Sbjct 1379 AATTGTAATCATCA-TATGGGCGGGGGTGAATCCTTTGCAGACGAC 1335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198992128