Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 221 1e-52 >seq3 Length=2745113 Score = 221 bits (244), Expect = 1e-52 Identities = 379/544 (70%), Gaps = 7/544 (1%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 |||||| ||||||||| ||||||||||||||||||||||| | |||||| | ||| | Sbjct 2542364 ATTTGGAACATGTACAAGAAGGCGGAAGCTTCCTTCTGGACTGCAGAGGAGATGGATCTC 2542423 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTT-TATCGAG--CGGTGAACAACATTTCATTAAA 61203 ||||| || ||| | |||||| | | | || | || || | |||||| Sbjct 2542424 TCCAAGGATATGCACGACTGGAACAATCGTCTCAATGCCGACGAGCGCTTTTTCATCTCC 2542483 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 ||||| | ||||| |||||||| ||||||||||||||||||||||| | | || ||| Sbjct 2542484 CATGTCCTCGCGTTTTTTGCCGCGTCGGACGGTATCGTCAATGAGAACCTTGTCGAGCGT 2542543 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| | | ||||| || | | ||||| || || |||||||||||||||||| ||| Sbjct 2542544 TTCTCCAACGAGGTTCAGGCCGCTGAGGCACGCTGCTTCTACGGCTTCCAGATTATGATG 2542603 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| ||||||| |||| ||| | | ||||| || || |||| ||| | | | Sbjct 2542604 GAGAACATCCACTCCGAGACCTACTCGCTGTTGATCGACACCTATATCAAGGACCCCGAG 2542663 Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGAT 61443 | || |||| ||||| | ||||||||||| || || | ||| ||| || || Sbjct 2542664 CAGCGCGAACACCTGTTCGACGCCATCGAGACTATCCCTTGCATCAAGAAGAAGGCAGAC 2542723 Query 61444 TGGGCCTTCAATTGGATCACCAGTACAACGG--CTACATTTGGTGAACGATTGCTGGCAT 61501 ||||| || ||||| | | | |||| | || | || | ||| || | |||| | Sbjct 2542724 TGGGCTTTGCGCTGGAT-ATCTG-ACAAGAGCTCTTCTTTCGCTGAGCGTCTTGTGGCTT 2542781 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 | || | || |||||| | |||||| || || || || | || || ||| | |||| Sbjct 2542782 TCGCCGCCGTAGAGGGTATCTTTTTCTCCGGCTCTTTCGCATCGATATTCTGGCTCAAGA 2542841 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | |||||||| ||||| || || || ||| || ||| | || || |||||||| | Sbjct 2542842 AGCGTGGACTCATGCCTGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGACGAGGGTA 2542901 Query 61622 TGCA 61625 |||| Sbjct 2542902 TGCA 2542905 Score = 159 bits (176), Expect = 3e-34 Identities = 365/550 (66%), Gaps = 17/550 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || ||||| ||||||||||| || ||||| || |||||||| || || ||| |||| | Sbjct 2541063 ATCTGGCGAATGTACAAAAAAGCAGAAGCATCTTTCTGGACAGTAGAAGAGATCGACCTA 2541004 Query 61147 TCCAAAGACATGAATGACTGG---GAGCGTTT-------ATCGAGCGGTGAACAACATTT 61196 ||| | || | | |||||| || ||| | | |||||||| | || Sbjct 2541003 TCCCATGATCTCACAGACTGGAACGACCGTCTCAATGCCAACGAGCGGT-------ACTT 2540951 Query 61197 CATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATT 61256 ||| |||| || || ||||| ||||| || ||||| || || || || ||| | | Sbjct 2540950 CATCTCGAATGTCTTAGCTTTCTTCGCCGCCTCCGACGGCATAGTGAACGAAAATCTCGT 2540891 Query 61257 GGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316 || || ||| | | ||||| |||| | ||||| | || ||||||||||||||||| Sbjct 2540890 CGAGCGCTTCTCTAACGAGGTTCAAGCTGCTGAGGCAAGATGCTTCTACGGCTTCCAGAT 2540831 Query 61317 TGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| ||||||| |||| ||| | |||||||| || ||||||| || Sbjct 2540830 AATGATAGAGAACATCCACTCCGAGACCTACTCGCTACTCATCGACACATACATCAAAGA 2540771 Query 61377 GCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAA 61436 | | || ||||| | | |||||||||| | || || | ||| ||| Sbjct 2540770 CCCTGACGAGCGTGATCACCTCCTCAATGCCATAACCTCCATTCCTTGCATCAAGAAGAA 2540711 Query 61437 AGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCT 61496 ||| || ||||| | ||||| || | ||| | |||||| || || | | Sbjct 2540710 AGCCGACTGGGCGCTGCGCTGGATATCCGACAAGACGTCGGTATTTGGGGAGCGGCTCGT 2540651 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || || || | || || || | || ||| ||||| || || |||| || ||| | Sbjct 2540650 TGCTTTCGCCGCTGTGGAAGGCATCTTCTTCTCCGGATCCTTCGCGTCAATATTCTGGCT 2540591 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| || ||||| |||||||| ||||| ||| || ||| | || |||||||| Sbjct 2540590 CAAGAAGCGCGGACTCATGCCCGGGCTGACGTTCTCTAACGAGCTCATCAGCCGCGACGA 2540531 Query 61617 GGGCATGCAT 61626 |||||||||| Sbjct 2540530 GGGCATGCAT 2540521 Score = 91.5 bits (100), Expect = 1e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 61755 ACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCT 61814 |||||| |||||||| || |||| ||||| || || || |||||||| ||||| Sbjct 2543084 ACTCATTGGCATGAACGCGACGCTCATGTGCCAGTACATCGAGTTCGTTGCCGATCGTCT 2543143 Query 61815 GTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGA 61874 | |||| | | |||| |||||| || ||| ||||| || || || ||||| Sbjct 2543144 GGTGGTTGCCCTCGGTAACCCTAAGATCTACAACGCGACGAACCCTTTCGACTTTATGGA 2543203 Query 61875 CATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 ||||| |||||| | ||||||||||| || |||||||| || || Sbjct 2543204 TATGATCTCGCTGCAAGGCAAGACGAACTTCTTCGAGAAGCGCGT 2543248 Score = 87.8 bits (96), Expect = 1e-12 Identities = 127/178 (71%), Gaps = 6/178 (3%) Strand=Plus/Minus Query 61745 TGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTG 61804 |||||||||| |||||||||||||| || |||| ||||| || || || || | Sbjct 2540348 TGCCCGTCTCGCTCATCGGCATGAACGCCTCGCTCATGTGTCAGTACATCGAGTTCGTCG 2540289 Query 61805 CCGACCGTCTGTTGGTCGATTTGGGTA---TGAAGCGGATCTATAATACGAAAAACCCAT 61861 ||||||| || ||||| | || | ||||| ||| || || ||||| | Sbjct 2540288 CCGACCGCCTCCTGGTCTCGCTCGGGAACCCGAAGC---ACTACAACTCGTCGAACCCCT 2540232 Query 61862 TTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 | || ||||||||| | || |||||| | |||||||| || || |||||||| ||||| Sbjct 2540231 TCGACTTCATGGACCTCATATCGCTGCAAGGCAAGACCAACTTCTTCGAGAAGCGTGT 2540174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567384639280