Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457895.1_202015-11- 03] 14 sequences; 27,696,343 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq9 352 5e-95 >seq9 Length=1647769 Score = 352 bits (390), Expect = 5e-95 Identities = 247/280 (88%), Gaps = 1/280 (0%) Strand=Plus/Plus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||||||||||| ||| ||| || ||| ||||||||| |||||||||| |||||| Sbjct 1351089 GTCTGGCCGGGCCTTACCTCTTGGTGAGCCGGCATGCCCTTTACTGGGTGTGTCGGGGAA 1351148 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 1351149 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATACATT 1351208 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1351209 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 1351268 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | |||||| ||| |||||||||||||||||| Sbjct 1351269 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTGCGTTGCTAGAGGTGAAATTCTTGGA 1351328 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGA 285 |||| ||||||||||||||||||||| || ||||||| Sbjct 1351329 TTTACGCAAGACTAACTACTGCGAAAGCATTTGCCAAGGA 1351368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199871872