Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq9 266 5e-69 >seq9 Length=1691937 Score = 266 bits (294), Expect = 5e-69 Identities = 191/216 (88%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 16 ACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAA 75 ||||| |||||||||||| |||||||| ||||||||||||||| |||||||||||| ||| Sbjct 1344993 ACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-CCTCGTTGAAGAGCAA 1344936 Query 76 CAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGG 134 |||||||||| |||||||||| ||||| | ||||| |||||||||| ||||| ||| Sbjct 1344935 TAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATTACCCAGACCTTCCGG 1344876 Query 135 CCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA 194 ||||||| || ||||| || | |||||||||||||||||||||||||||||||||| Sbjct 1344875 CCAAGGTTATGAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA 1344816 Query 195 GGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 |||||||||||||||||||||||||||||||||||| Sbjct 1344815 GGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 1344780 Score = 80.6 bits (88), Expect = 4e-13 Identities = 51/54 (94%), Gaps = 1/54 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGG 54 |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||| Sbjct 1345146 GTACAAAGGGCAGGGACGTAATCAACGCGAGC-TGATGACTCACGCTTACTAGG 1345094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999898010