Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq9 223 4e-56 >seq9 Length=1691937 Score = 223 bits (246), Expect = 4e-56 Identities = 168/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 1344224 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 1344165 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1344164 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 1344105 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||||| | || ||||| | |||||||||||||||| ||| || | |||||| Sbjct 1344104 CGACACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGGCCCGGCCAGACAGTAC 1344045 Query 179 TCGCCGTGAGGCGGACC 195 |||| |||| |||| Sbjct 1344044 ATACCGTTAGGCAGACC 1344028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199919276