Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11-
03] 14 sequences; 27,988,318 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq3 205 7e-48
seq5 123 2e-23
>seq3
Length=3164952
Score = 205 bits (226), Expect = 7e-48
Identities = 376/545 (69%), Gaps = 7/545 (1%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| ||||||||||| || ||||| || |||||||| | || ||| | || ||
Sbjct 1890712 ATCTGGCAAATGTACAAAAAAGCTGAAGCGTCTTTCTGGACTGCCGAAGAGATGGACCTG 1890653
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGT-TTATCGAGCGGTGAACAACATTTCATTAA 61202
|| ||||| | | |||||| | || ||| ||| | ||| | || || |
Sbjct 1890652 TCAAAAGATCTCCACGACTGGAATAACCGCCTTAACGA-CAATGAGCGTCACTTTGTCTC 1890594
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
||||| | ||||| |||||||| || || || |||||||| ||||| | | || ||
Sbjct 1890593 GCATGTCCTCGCGTTTTTTGCCGCCTCTGATGGCATCGTCAACGAGAACCTTGTTGAGCG 1890534
Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| || | ||||| || | | | ||||||||||| |||||||| ||||| ||| ||
Sbjct 1890533 CTTCTCGAACGAGGTTCAGGCGGCTGAGGCGCGTTGCTTCTACGGGTTCCAAATTATGAT 1890474
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
||| ||| ||||| |||| ||| |||| |||||||| ||||||| ||| |
Sbjct 1890473 GGAAAATATCCACAGCGAGACCTACTCCCTTCTTATCGATACTTACATCAAGGACCCTAA 1890414
Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442
| |||| || | ||| |||| | ||||| || || || || |||| |||||
Sbjct 1890413 GCAACGCGAGTACCTTTTCGATGCTGTTGAGACCATTCCCTGTGTCAAAAGGAAGGCGGA 1890354
Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACG-GCTACATTTGGTGAACGATTGCTGGCAT 61501
||||| | |||||| || | | || | ||||||| ||| ||||| | || |
Sbjct 1890353 CTGGGCACTACGCTGGATCTCC-GATCGTCGCTCCACATTTGCTGAGCGATTAGTCGCCT 1890295
Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561
| || | || ||||| | || ||| || || || ||| ||||||| ||||||||||
Sbjct 1890294 TCGCCGCTGTGGAGGGCATTTTCTTCTCCGGTTCTTTCGCCTCAATCTTCTGGTTGAAGA 1890235
Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621
| ||||| || ||||| || || |||||| |||||| | || || |||||||| |
Sbjct 1890234 AGCGTGGCCTCATGCCTGGACTCACCTTCTCCAATGAACTCATCAGTCGTGACGAGGGAA 1890175
Query 61622 TGCAT 61626
|||||
Sbjct 1890174 TGCAT 1890170
Score = 199 bits (220), Expect = 3e-46
Identities = 386/560 (69%), Gaps = 15/560 (3%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
||||||| |||||||| || || | ||||| || |||||| || ||| ||||| ||
Sbjct 1891922 ATTTGGCAGATGTACAAGAAAGCCCAGGCTTCGTTTTGGACGTCCGAAGAGATCGATATG 1891981
Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATC-GAGCGGT---GAACAACATTTCATTAA 61202
|||||||| || |||||| | || | | | || | |||| ||||||||
Sbjct 1891982 TCCAAAGATATCTTCGACTGGAA-CGATAACCTGAATGACAACGAACGCCATTTCATATC 1892040
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
| |||| |||| || ||||||||||| |||||||| ||||| |||||| | |||| ||
Sbjct 1892041 ATATGTCCTGGCATTTTTTGCCGCTTCCGACGGTATTGTCAACGAGAATCTGGTGGAGCG 1892100
Query 61263 --TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
||||| || || || |||| | || | || ||||| || || || || ||
Sbjct 1892101 GTTTTCGAGC--GAAGTACAAGCCGCTGAAGTCCGCTGTTTTTATGGATTTCAAATCATG 1892158
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380
||||| || | |||||||| | ||| | | ||||||||||| |||||| ||
Sbjct 1892159 ATGGAAAACATTCACTCGGAAACATACTCTCTCCTCATCGATACCTACATCTCTGACTCT 1892218
Query 61381 GCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCG 61440
| | |||| | | |||||| | |||||||| ||||| || |||| ||| |
Sbjct 1892219 CAGCAGCGTGGCCTCCTCTTCAATTCGATCGAGACTATACCATGCGTCAAGCAGAAGACC 1892278
Query 61441 GATTGGGCCTTCAATTGGATCACCAGTACAACGG-CTACATTTGGTGAACGA--TTGCTG 61497
|| |||||| ||| |||||| | | |||||| | || |||| |||| ||| ||
Sbjct 1892279 GAGTGGGCCCTCAGGTGGATC-TCTGACCAACGGTCGACGTTTG--CCACGAGGTTGGTG 1892335
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| || |||| ||| || || | || ||| ||||| ||||| ||||||| ||| ||
Sbjct 1892336 GCGTTCGCGGCGGTAGAAGGGATCTTCTTCTCCGGATCTTTTGCTTCAATCTTCTGGCTG 1892395
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
|||||||| || || ||||| ||| | ||||| || || |||| || |||||
Sbjct 1892396 AAGAAACGAGGTCTCATGCCTGGTTTAACCTTTTCTAACGAACTGATTAGTCGGGACGAA 1892455
Query 61618 GGCATGCATTGTGATTTTGC 61637
|| |||||| ||||||||
Sbjct 1892456 GGGATGCATACAGATTTTGC 1892475
>seq5
Length=2330625
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403
|| ||||| || |||||||| || |||||||| |||||||| || ||||| |||||
Sbjct 512739 AAAAGATCGGGGATCCAGAGCGCATAGAAGAGGTCGCGTGCACGGACTTCCTCCTTGCCG 512680
Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463
|||||||| || | ||||| ||| || |||| ||||| |||||||| || || |||||
Sbjct 512679 TGATTTTTACGGAGGTCGATGAATTCGTAGATATCGGCGTGCCATGGCTCAAGATAGATT 512620
Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523
|| || | ||| || ||| || ||||| ||||| |||||||| || | |
Sbjct 512619 GCAAAAGCACCCGGGCGCTTGTTACCGCCTTGATCGACATAGCGAGCAGTCGCGTCGTAT 512560
Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574
| || | ||| || || | ||||| || | |||||||| || |||||
Sbjct 512559 GCGCGGAGCATGGGAACAATACCGTTGGAGTATCCATTGGTACCAGCGATG 512509
Score = 120 bits (132), Expect = 2e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403
|| ||||| || ||||| || || |||||||| || ||||| || ||||| |||||
Sbjct 514780 AAAAGATCGGGGATCCAAAGTGCATAGAAGAGGTCACGTGCACGAACTTCCTCCTTGCCG 514721
Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463
|| ||||| || | ||| | ||||||| | | |||||||||||||| || | |||||
Sbjct 514720 TGGTTTTTACGGAGGTCAACGAACTCATATGTATCGGCATGCCATGGCTCAATATAGATT 514661
Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523
||||| | |||| ||||| || ||||| ||||| |||||||| | ||| |
Sbjct 514660 GCGAAAGCGCCCGGGAGTTTGTTACCGCCTTGATCGACATAGCGAGCAGTCTCATTGTAC 514601
Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574
| || | ||| || || | || ||||| | |||||||| ||| | |||
Sbjct 514600 GCGCGGAGCATGGGAACAATACCATTAGAATATCCATTGGTACCGGCAATG 514550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567932164960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |