Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457955.1_202015-11- 03] 14 sequences; 27,988,318 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq10 105 9e-18 >seq10 Length=1483421 Score = 105 bits (116), Expect = 9e-18 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 162455 TCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAG-GAGACACCCCAGAAAGAA 162513 ||||||||||| ||| |||||| || ||||| || ||| | | | || ||| | || Sbjct 495762 TCTACCAAGCGTCCACTTCTGAGCTGTACGGGCTCGTGCAGAGCGTC-CCGCAGGACGAG 495820 Query 162514 ACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATC 162573 | ||| || | || || || ||||| ||||| ||||| || || || | |||||||||| Sbjct 495821 AACACGCCGTTCTACCCGCGCTCCCCGTATGGCGTTGCAAAGCTGTACGCGTTCTGGATC 495880 Query 162574 ATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCAC 162633 ||| ||||||||||| || | ||| |||| | | |||||| || ||||| ||| Sbjct 495881 TGCAAGAACTACAGGGAGGCGTACGGCATGTATGCGTGCAACGGTATCCTTTTCAACCAC 495940 Query 162634 GAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATC 162675 || ||| | || | || || || || || ||||||||| Sbjct 495941 GAGAGCCCGCGTCGTGGCCGCACCTTTGTGACGCGCAAGATC 495982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691459078994640