Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20annosum_20[genbank_20GCA_5F001457995.1_202015-11- 03] 14 sequences; 27,530,324 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 2e-17 >seq6 Length=2129081 Score = 95.1 bits (104), Expect = 2e-17 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 76 CAGGCCGAACAGGCGCTCCTTGATGATTCCATCGCGCTCGTTCCACAGGGCCAGGCCCAG 135 || |||||| || ||||| |||| || | ||| ||||||||||| | || || | Sbjct 1859049 CACGCCGAAAAGACGCTCTTTGAGCATGCGGTCGTTCTCGTTCCACAAAGAGAGTCCAAA 1858990 Query 136 GCACCAACGTTGCGCCTTGTCACTGAACCCCGCCAGGCCGTCCTCGCCCCAACGGTAGGC 195 |||| || || ||||| ||||| || || | |||||| |||||||| ||||| || Sbjct 1858989 GCACAGCCGCTGGTGGTTGTCGCTGAAGCCTGCGATGCCGTCTTCGCCCCAGCGGTACGC 1858930 Query 196 GCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCCCAGGCGTCGCCATCGGCGCTGTAGTC 255 |||| ||| || || || || ||||||| ||||| | ||||||| | || || || Sbjct 1858929 GCGGGAGCGGGCCTGTTCGTGCGGGAAGTGCGCCCACACATCGCCATTGTCGGAATAATC 1858870 Query 256 TTCGCGCACCGTGCCCCATTGGCG 279 || | || ||| || |||||| Sbjct 1858869 CTCCCTAACGGTGGCC--TTGGCG 1858848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007999858880