Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457915.1_202015- 11-03] 14 sequences; 26,374,274 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq9 535 2e-149 >seq9 Length=1679134 Score = 535 bits (592), Expect = 2e-149 Identities = 544/698 (78%), Gaps = 42/698 (6%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| || | |||| ||||||||||||||||||||||||||| ||||||| ||| ||| Sbjct 1366283 TGTGATGCGCTCTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAAT 1366342 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| | || |||||| Sbjct 1366343 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGGGAGGGAAAGA 1366402 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||||||||||||||||| || |||||||||||||||||||||| || || Sbjct 1366403 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATT 1366462 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC--CTCGGCCGGTGCACTCTTCTGC- 259 | | ||| | | || | | |||| || | |||| ||||| ||| ||||| Sbjct 1366463 GAAGTCAGTCGCGTCCACCGGGACTCAGCCTTGCGTTCTCGCTCGGTGTACT-TTCTGGT 1366521 Query 260 GGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAA-TGTGGCCCCCTTC 318 || | ||||||||||| | | |||||| ||||| | ||||| |||||| || ||| Sbjct 1366522 GGACGGGCCAGCATCAATTTTGATCGTCGGA-AAAGGATCGGGGAAATGTGGCACCTTTC 1366580 Query 319 GGGGGGTGTTATAGCC--CGG-----------GGT---------GGAATGCGGCCCGCCT 356 |||| ||||||||| | ||| ||| |||| | || |||| Sbjct 1366581 GGGGTGTGTTATAGTCTCCGGTCGCATACGACGGTTGGGATTGAGGAACTCAGCATGCCT 1366640 Query 357 GGACTGA---GGTCCGCGC----TCCGGCT-AGGATGCTGGCGTAATGGTTGTAAGCGGC 408 || | ||| ||| | || ||| |||||||||||||||||| | ||| || | Sbjct 1366641 TTACGGTCGGGGTTCGCCCACGTTCATGCTTAGGATGCTGGCGTAATGGCTTTAAACGAC 1366700 Query 409 CCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCC 468 |||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||| Sbjct 1366701 CCGTCTTGAAACACGGACCAAGGAGTCTAACATGCCCGCGAGTGTTCGGGTGGAAAACCC 1366760 Query 469 GTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCC-GT-GAGG-GTGCACCATCGACCGA 525 |||||||||||||||||||| || ||||| | | || | || | ||||| || ||| Sbjct 1366761 GTGCGCGTAATGAAAGTGAA---AGTTGGGACCTCTGTCGTGGAGGGCACCGACGCCCGG 1366817 Query 526 TCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTG 585 || || | | || |||| || | ||||| | |||||||||||||||||||||| Sbjct 1366818 ACCAGAACTTCTGTGACGGATCTGCGGGAGAGCGTGTATGTTGGGACCCGAAAGATGGTG 1366877 Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 1366878 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTG 1366937 Query 646 GCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||||||||||||||||||| Sbjct 1366938 ACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 1366975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999699700