Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457915.1_202015- 11-03] 14 sequences; 26,374,274 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq6 100 6e-19 >seq6 Length=2246423 Score = 100 bits (110), Expect = 6e-19 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 76 CAGGCCGAACAGGCGCTCCTTGATGATTCCATCGCGCTCGTTCCACAGGGCCAGGCCCAG 135 || |||||| || ||||| |||| || | ||| ||||||||||| || || || | Sbjct 1872638 CACGCCGAAAAGACGCTCTTTGAGCATGCGGTCGTTCTCGTTCCACAAGGAGAGCCCGAA 1872579 Query 136 GCACCAACGTTGCGCCTTGTCACTGAACCCCGCCAGGCCGTCCTCGCCCCAACGGTAGGC 195 |||| || || ||||| ||||| || || | ||||||||||||||| ||||| || Sbjct 1872578 GCACAGCCGCTGGTGGTTGTCGCTGAAGCCTGCGATGCCGTCCTCGCCCCAGCGGTACGC 1872519 Query 196 GCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCCCAGGCGTCGCC 240 |||| ||| || || || || ||||||| ||||| | ||||| Sbjct 1872518 GCGGGAGCGGGCCTGTTCGTGCGGGAAGTGCGCCCACACATCGCC 1872474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007999858880