Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457915.1_202015- 11-03] 14 sequences; 26,374,274 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq9 744 0.0 >seq9 Length=1679134 Score = 744 bits (824), Expect = 0.0 Identities = 473/508 (93%), Gaps = 4/508 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||| Sbjct 1364201 GTACTCATTCCAATTATAAGACCCAAAAGAGCCCTATATTGTTATTTATTGTCACTACCT 1364142 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1364141 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1364082 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 1364081 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 1364022 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||| |||||||||||| ||||||||||| |||||||||| Sbjct 1364021 GGCCTCTATCCTACCATCGAAAGATGATAGGGCAGATATTTGAATGAAGCATCGCCGGCA 1363962 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC-AAGGAGCCCCGAAGGGCGTTGG 299 ||||||||||||||||| |||||||||||||||||| ||||||| ||| ||||||| Sbjct 1363961 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAAAGGAGCGGCGAGCCGCGTTGG 1363902 Query 300 TTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTC 357 ||||||||||||||||||||||||| || |||||||||| || | |||||||||||||| Sbjct 1363901 TTTTTTATCTAATAAATACACCCCTCCCGGAAGTCGGGGCTTGATTGCATGTATTAGCTC 1363842 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||| Sbjct 1363841 TAGAATTACCACAGTTATCCATGTAGCAAGGTACCATCAAATAAACTATAACTGATTTAA 1363782 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATC 476 |||||||||||||||||||| ||| | | ||| ||||||||||||||||||||||||||| Sbjct 1363781 TGAGCCATTCGCAGTTTCACAGTACAAATTTGTTTATACTTAGACATGCATGGCTTAATC 1363722 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 1363721 TTTGAGACAAGCATATGACTACTGGCAG 1363694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399788544