Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457915.1_202015- 11-03] 14 sequences; 26,374,274 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 194 1e-44 seq5 141 7e-29 >seq3 Length=2894765 Score = 194 bits (214), Expect = 1e-44 Identities = 385/560 (69%), Gaps = 15/560 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| || || | ||||| || |||||| || ||| ||||| || Sbjct 1869464 ATTTGGCAGATGTACAAGAAAGCCCAGGCTTCGTTTTGGACGTCCGAAGAGATCGATATG 1869523 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATC-GAGCGGT---GAACAACATTTCATTAA 61202 |||||||| || |||||| | | | | | || | | |||| |||||||| Sbjct 1869524 TCCAAAGATATCTTCGACTGGAA-CAATAACCTGAATGATAACGAACGCCATTTCATATC 1869582 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 | |||| ||||||| ||||||||||| |||||||| ||||| |||||| | |||| || Sbjct 1869583 ATATGTCCTGGCGTTTTTTGCCGCTTCCGACGGTATTGTCAACGAGAATCTGGTGGAGCG 1869642 Query 61263 --TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 ||||| || || || |||| | || | || ||||| || || |||||||| Sbjct 1869643 GTTTTCGAGC--GAAGTACAAGCCGCTGAAGTCCGCTGTTTTTATGGATTCCAGATCATG 1869700 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 ||||| || | |||||||| | ||| | | ||||||||||| ||||| || Sbjct 1869701 ATGGAAAACATTCACTCGGAAACATACTCTCTCCTCATCGATACCTACATTTCTGACTCT 1869760 Query 61381 GCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCG 61440 | | ||||| | |||||| | |||||||| ||||| || |||| ||| | Sbjct 1869761 CAGCAGCGTGACTTCCTCTTCAATTCGATCGAGACTATACCATGCGTCAAGCAGAAGACC 1869820 Query 61441 GATTGGGCCTTCAATTGGATCACCAGTACAACG-GCTACATTTGGTGAACGA--TTGCTG 61497 || |||||| ||| |||||| | | ||||| | || |||| |||| ||| || Sbjct 1869821 GAGTGGGCCCTCAGGTGGATC-TCTGATCAACGATCGACGTTTG--CCACGAGGTTGGTG 1869877 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || || || | ||| || || | || ||| ||||| ||||| ||||||| ||| || Sbjct 1869878 GCGTTCGCAGCGGTAGAAGGGATCTTCTTCTCCGGATCTTTTGCTTCAATCTTCTGGCTG 1869937 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 |||||||| || || ||||| ||| | ||||| || || |||| || ||||| Sbjct 1869938 AAGAAACGAGGTCTCATGCCTGGTTTAACCTTTTCTAACGAACTGATTAGTCGGGACGAA 1869997 Query 61618 GGCATGCATTGTGATTTTGC 61637 || ||||| |||||||| Sbjct 1869998 GGGATGCACACAGATTTTGC 1870017 Score = 192 bits (212), Expect = 5e-44 Identities = 373/545 (68%), Gaps = 7/545 (1%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| || || ||||| || |||||||| | || || | || || Sbjct 1868248 ATCTGGCAAATGTACAAGAAAGCTGAAGCGTCTTTCTGGACCGCCGAAGAAATGGACCTG 1868189 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGT-TTATCGAGCGGTGAACAACATTTCATTAA 61202 || ||||| | | |||||| | || ||| ||| | ||| | || || | Sbjct 1868188 TCAAAAGATCTCCACGACTGGAATAACCGCCTTAACGA-CAATGAGCGTCACTTTGTCTC 1868130 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||| | ||||| ||||| || || || ||||||||||| ||||| | | || || Sbjct 1868129 GCATGTCCTCGCGTTTTTTGCTGCCTCTGATGGTATCGTCAACGAGAACCTTGTTGAGCG 1868070 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | | ||||||||||| |||||||| ||||| ||| || Sbjct 1868069 CTTCTCGAACGAGGTTCAGGCGGCTGAGGCGCGTTGCTTCTACGGGTTCCAAATTATGAT 1868010 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||| ||| ||||| |||| ||| |||| |||||||| ||||||| ||| | Sbjct 1868009 GGAAAATATCCACAGCGAGACCTACTCCCTTCTTATCGATACTTACATCAAGGACCCTAA 1867950 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 | |||| || | || |||| | ||||| || || || || |||| ||||| Sbjct 1867949 GCAACGCGAGTACCTTTTTGATGCTGTTGAGACCATTCCCTGTGTCAAAAGGAAGGCGGA 1867890 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACG-GCTACATTTGGTGAACGATTGCTGGCAT 61501 ||||| | |||||| || | | || | ||||||| ||| ||||| | || | Sbjct 1867889 CTGGGCACTACGCTGGATCTCC-GATCGTCGCTCCACATTTGCTGAGCGATTAGTCGCCT 1867831 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 | || | || ||||| | || ||| || || || ||| ||||||| |||||||||| Sbjct 1867830 TCGCCGCTGTGGAGGGCATTTTCTTCTCCGGTTCTTTCGCCTCAATCTTCTGGTTGAAGA 1867771 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | ||||| || ||||| || || |||||| |||||| | || || |||||||| | Sbjct 1867770 AGCGTGGCCTCATGCCTGGACTCACCTTCTCCAATGAACTCATCAGTCGTGACGAGGGAA 1867711 Query 61622 TGCAT 61626 ||||| Sbjct 1867710 TGCAT 1867706 >seq5 Length=2077621 Score = 141 bits (156), Expect = 7e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || ||||| || |||||||| || |||||||| |||||||| || ||||| ||||| Sbjct 447430 AAAAGATCGGGGATCCAGAGTGCATAGAAGAGGTCGCGTGCACGGACTTCCTCCTTGCCG 447371 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 ||||||||||| | ||||| ||| || |||| ||||| |||||||| || |||||||| Sbjct 447370 TGATTTTTGCGGAGGTCGATGAATTCGTAGATATCGGCGTGCCATGGCTCAAGGTAGATT 447311 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523 || || | ||| || ||| || ||||||||||| |||||||| || | | Sbjct 447310 GCAAAAGCACCCGGGCGCTTGTTACCGCCTTGGTCGACATAGCGAGCAGTCGCGTCGTAC 447251 Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 |||| | ||| || || | ||||| || | |||||||| || ||||| Sbjct 447250 GCACGGAGCATGGGAACAATACCGTTGGAGTATCCATTGGTACCAGCGATG 447200 Score = 93.3 bits (102), Expect = 3e-14 Identities = 222/336 (66%), Gaps = 0/336 (0%) Strand=Plus/Minus Query 66587 GCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA 66646 ||||| || | ||||| ||| || ||||| |||||||||||||| ||| |||||| Sbjct 447133 GCCCGAATGTTGTGAATATTGAGTCCAATGCCACCGGCCGTCTTGCTGATCATAGCACAG 447074 Query 66647 TCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCAT 66706 | || || | || || ||||||||||| | || ||| | ||| | || Sbjct 447073 TTCTTCAGAGTTTCATAGATTCCCTCAATGGAGTCTTCTTTCATGCAAACCAGGAAACAC 447014 Query 66707 GAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAG 66766 || || | ||| || |||||||| | || |||||| || |||| ||||| || ||| Sbjct 447013 GAGCTCAATTGAGGATTGGGTGTACCCGCGTTGAAGAGTGTTGGTGAGGCGTGAGTGAAG 446954 Query 66767 TAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATC 66826 ||| | |||||| ||||| || || || | ||| | | |||| ||||| Sbjct 446953 TAACGTTCAGACATTAGGTTGTAGGTTTCAATAGCGCGATCGACATCAGCGCCGTGAATG 446894 Query 66827 CCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGC 66886 |||| || ||||| | | || || || ||||| | | || | ||||| | Sbjct 446893 CCGACAGCTACGCGCATGATCATGTGCTGTGGACGTTCTGCGACACGGCCATTGATCCGA 446834 Query 66887 ATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAG 66922 | | ||| || || ||||| ||||||| ||||||| Sbjct 446833 AGAAGGTAAGAACGCTCCAGCGTCTTGAAACCAAAG 446798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567932164960