Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457915.1_202015- 11-03] 14 sequences; 26,374,274 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq10 104 3e-17 >seq10 Length=1343669 Score = 104 bits (114), Expect = 3e-17 Identities = 241/361 (67%), Gaps = 2/361 (1%) Strand=Plus/Plus Query 162316 GAAATATATAACCTAGGGGCTCAGAGTCACGTTAAGGTTTCATTTGATCAGCCTGAATAC 162375 ||||| ||||| || || || ||| ||||| ||||| ||||| || | | || ||| Sbjct 422069 GAAATCTATAATCTCGGCGCGCAGTCGCACGTCAAGGTCTCATTCGAGATGGCCGAGTAC 422128 Query 162376 ACAGCACAGACCGACGCATTGGGCACTCTAAGGGTGCTAGAAGCCGTCCGTCTTCTTGGT 162435 || | | ||||| | ||||| || | |||| || || || || || Sbjct 422129 ACCGGCGACGTCGACGGGCTCGGCACGCTTCGCCTGCTCGACGCTGTGCGGACGTGCGGA 422188 Query 162436 ATGGAATCATACGTAAGAATCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAG 162495 | || | |||| | ||||||||||| ||| |||||| || ||||| || ||| Sbjct 422189 CTCGAGCGACACGTGCGCTTCTACCAAGCGTCCACTTCTGAGCTGTACGGGCTCGTGCAG 422248 Query 162496 -GAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAA 162554 | | | || ||| | || | ||| || | || || || ||||| ||||| ||||| || Sbjct 422249 AGCGTC-CCGCAGGACGAGAACACGCCGTTCTACCCGCGCTCCCCGTATGGCGTTGCAAA 422307 Query 162555 ACTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAG 162614 || || | |||||||||| ||| ||||||||||| || | ||| | || | | Sbjct 422308 GCTGTACGCGTTCTGGATCTGCAAGAACTACAGGGAGGCGTACGGCATGTACGCGTGCAA 422367 Query 162615 CGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGAT 162674 |||||| || ||||| ||||| ||| | || | || || ||||| || ||||| || Sbjct 422368 CGGTATCCTTTTCAACCACGAGAGCCCGCGTCGTGGCCGCACCTTCGTGACGCGCAAAAT 422427 Query 162675 C 162675 | Sbjct 422428 C 422428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691459078994640