Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterobasidion_20irregulare_20[genbank_20GCA_5F001457935.1_202015- 11-03] 14 sequences; 26,374,808 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq9 540 4e-151 >seq9 Length=1635283 Score = 540 bits (598), Expect = 4e-151 Identities = 545/698 (78%), Gaps = 42/698 (6%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| || | |||| ||||||||||||||||||||||||||| ||||||| ||| ||| Sbjct 1310183 TGTGATGCGCTCTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAAT 1310242 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 1310243 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 1310302 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||||||||||||||||| || |||||||||||||||||||||| || || Sbjct 1310303 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATT 1310362 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC--CTCGGCCGGTGCACTCTTCTGC- 259 | | ||| | | || | | |||| || | |||| ||||| ||| ||||| Sbjct 1310363 GAAGTCAGTCGCGTCCACCGGGACTCAGCCTTGCGTTCTCGCTCGGTGTACT-TTCTGGT 1310421 Query 260 GGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAA-TGTGGCCCCCTTC 318 || | ||||||||||| | | |||||| ||||| | ||||| |||||| || ||| Sbjct 1310422 GGACGGGCCAGCATCAATTTTGATCGTCGGA-AAAGGATCGGGGAAATGTGGCACCTTTC 1310480 Query 319 GGGGGGTGTTATAGCC--CGG-----------GGT---------GGAATGCGGCCCGCCT 356 |||| ||||||||| | ||| ||| |||| | || |||| Sbjct 1310481 GGGGTGTGTTATAGTCTCCGGTCGCATACGACGGTTGGGATTGAGGAACTCAGCATGCCT 1310540 Query 357 GGACTGA---GGTCCGCGC----TCCGGCT-AGGATGCTGGCGTAATGGTTGTAAGCGGC 408 || | ||| ||| | || ||| |||||||||||||||||| | ||| || | Sbjct 1310541 TTACGGTCGGGGTTCGCCCACGTTCATGCTTAGGATGCTGGCGTAATGGCTTTAAACGAC 1310600 Query 409 CCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCC 468 |||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||| Sbjct 1310601 CCGTCTTGAAACACGGACCAAGGAGTCTAACATGCCCGCGAGTGTTCGGGTGGAAAACCC 1310660 Query 469 GTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCC-GT-GAGG-GTGCACCATCGACCGA 525 |||||||||||||||||||| || ||||| | | || | || | ||||| || ||| Sbjct 1310661 GTGCGCGTAATGAAAGTGAA---AGTTGGGACCTCTGTCGTGGAGGGCACCGACGCCCGG 1310717 Query 526 TCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTG 585 || || | | || |||| || | ||||| | |||||||||||||||||||||| Sbjct 1310718 ACCAGAACTTCTGTGACGGATCTGCGGTAGAGCGTGTATGTTGGGACCCGAAAGATGGTG 1310777 Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 1310778 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTG 1310837 Query 646 GCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||||||||||||||||||| Sbjct 1310838 ACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 1310875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999699700