Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermannia_20corniformis_20[genbank_20GCA_5F001599935.1_202016-03- 01] 129 sequences; 20,721,755 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq31 96.9 1e-17 >seq31 Length=217305 Score = 96.9 bits (106), Expect = 1e-17 Identities = 132/183 (72%), Gaps = 5/183 (3%) Strand=Plus/Plus Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGA 211 || |||||||||||||||| || |||||||||||||||||||||| || ||| | ||| Sbjct 217016 CTGTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGT 217075 Query 212 CTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGC 271 | ||| ||| | |||| |||| || ||||||| ||| | | | | || || | Sbjct 217076 CGTGCGCGCTGGGACTCAGCCGG---TTCTGCCGGTGTACTTCCCAGTGTGCGGGTCAAC 217132 Query 272 ATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATA 331 ||||| | | | |||||| ||| |||| ||||| |||| ||| |||||||| Sbjct 217133 ATCAGTTTAGATCGCTGGATAAGGGCATTAGGAACGTGGCTCCCT--CGGGAGTGTTATA 217190 Query 332 GCC 334 ||| Sbjct 217191 GCC 217193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079997232950