Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq8 95.1 2e-17 >seq8 Length=1060936 Score = 95.1 bits (104), Expect = 2e-17 Identities = 172/252 (68%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 ||||||||||||||| | || |||| ||||| || |||||||||| || | || Sbjct 353128 TTCACCGTGGTTGCCTTGGGAAGAAGTCAGACCGAAAAGACGCTCCTTGAGGAAGTCGTC 353187 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTTGTCACTGAACCCCGC 168 ||||||| || || ||| | ||| ||| || ||||| || || || Sbjct 353188 TTTGCCGTTCCAGAGCGCAAGGGAGAAACACAGACGCTGGTGGTTGTCCGAGACACCAGC 353247 Query 169 CAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGC 228 | |||||||| ||||| ||||| || |||||||| |||| |||| || ||| || Sbjct 353248 AATACCGTCCTCACCCCAGCGGTACGCACGGCTGCGGGCATCGTCAAAGGTGAACGAGTT 353307 Query 229 CCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAG 288 ||| || || || | ||| |||||| || || || || ||||| ||||| || || Sbjct 353308 CCACGCATCACCGTTGGCAGAGTAGTCCTCACGAACGGTACCCCACTGGCGCTCTGACAA 353367 Query 289 GTAGGGGCCCCA 300 || || ||||| Sbjct 353368 ATAAGGACCCCA 353379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007999667360