Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8 197 1e-45 >seq8 Length=1060936 Score = 197 bits (218), Expect = 1e-45 Identities = 252/347 (73%), Gaps = 0/347 (0%) Strand=Plus/Minus Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 |||||||| || | ||| |||||||||| ||| || || ||| || | || || ||| Sbjct 57794 GGACACATGAGTGTCCAGTCACCATCCTCTTCGACGCGCTTCATGAACAAGTCGGGAATC 57735 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 || || || ||||| | |||||||| || || || |||||||||| ||||||||| Sbjct 57734 CAAAGCGCATAGAACAAGTCGCGTGCGCGAACTTCTTCCTTGCCGTGATTCTTGCGCAAG 57675 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478 ||||| || ||||||| |||||||||||| ||||| || ||||||||||| | || | Sbjct 57674 TCGAGAAAGTCAAAGACGTCGGCATGCCAAGGTTCGAGATAGATGGCGAATGCACCGGGA 57615 Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538 || ||| || ||||| ||||| || ||||| | || | | | || | ||| || Sbjct 57614 CGCTTGTTACCTCCTTGATCGACATAACGAGCTGTAGCGTCGTATGCGCGAAGCATGGGA 57555 Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCG 66598 |||| ||||| || | ||| || |||||| | ||| ||| ||| || || || | | Sbjct 57554 ACGATACCGTTCGAGTAGCCGTTAGTGCCGGCAATGTAGGAGCCTTTTGAGCGAATGTTG 57495 Query 66599 TGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA 66645 || | | ||||| ||||| ||||||||||| ||||| |||||| Sbjct 57494 TGGATGTGGAGACCGATACCGCCGGCCGTCTTGGAGATCATAGCACA 57448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567840103120