Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq10544 333 6e-89 >seq10544 Length=351 Score = 333 bits (368), Expect = 6e-89 Identities = 238/270 (88%), Gaps = 4/270 (1%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| | ||| ||||||| |||||||||||||| |||||||||||| || | ||| Sbjct 82 CTTTACAACCATAAGGCCTTCTT-CACACACGCGGCAT-GGCTGGATCAGGGTTCCCCCC 139 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 140 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 199 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| | ||||||||||||||||| | ||| ||||||||||||||| ||| ||||| || Sbjct 200 TGTGGCGGATCATCCTCTCAGACCCGCTACAGATCGTCGCCTTGGTAGGCCTTTACCCCA 259 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAA--GGTCCCCTGC 238 |||||||||||||||||| ||||||||||| || ||||||| | || | |||||||| Sbjct 260 CCAACTAGCTAATCCGACTTAGGCTCATCTATTAACGCAAGGTCACAAGTGATCCCCTGC 319 Query 239 TTTCTCCCGTAGGACGTATGCGGTATTAGC 268 |||| |||||||| |||||||||||||||| Sbjct 320 TTTCCCCCGTAGGGCGTATGCGGTATTAGC 349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071885360320