Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11]
10,694 sequences; 59,384,214 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq668 764 0.0
seq10574 178 4e-42
>seq668
Length=8863
Score = 764 bits (846), Expect = 0.0
Identities = 497/540 (92%), Gaps = 7/540 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 5708 CTTTTGTTCTACTCGAGATTTCTGTTCTCGATGAGTCCCCCTTAGGACACCTGCGTTATC 5649
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 5648 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 5589
Query 127 GGCCCGCGAAGGACCTT-AACGCCAGAAAATGGT-CGGTGAAGACCAGTTCCGCTTCATT 184
|||| | || |||||| || |||| || ||| | || || |||| ||||| |||||
Sbjct 5588 GGCCTGTAAAAGACCTTGAAAGCCAAAAGGTGGGACTGTTAATCCCAGCTCCGCCTCATT 5529
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244
|| |||||||||| ||||||| ||||||||||||||| |||||||| |||||||||
Sbjct 5528 GAATAAGTAAAAAGACGATAAAGGTAGTGGTATTTCAACGGCGCCGAA---GCTCCCACT 5472
Query 245 TATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303
||| ||||||| ||| | ||| |||||||| ||| ||||||||||||||||||||||||
Sbjct 5471 TATGCTACACC-CTCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTC 5413
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 5412 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 5353
Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5352 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 5293
Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5292 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 5233
Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 5232 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 5173
>seq10574
Length=200
Score = 178 bits (196), Expect = 4e-42
Identities = 165/204 (81%), Gaps = 8/204 (4%)
Strand=Plus/Minus
Query 94 ACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGC-GAAGGAC--CTTAACGCCA 150
|||||||||||||||||||| || ||||||||| || || |||| | ||| | |
Sbjct 200 ACTCCCCACCTGACAATGTCCTCCGCCCGGATCGACCTGCCGAAGCAAGTCTTGGATCTA 141
Query 151 GAAAATGGTCGGTGAAGACCAG-TTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGT 209
|||| || | || || | ||||| |||| || ||||||||| |||| ||| ||
Sbjct 140 AAAAAAGGG-GTTGTTACCCCGCTTCCGGTTCACGGAGTAAGTAAAATAACGTTAAAAGT 82
Query 210 AGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTC 269
|||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||
Sbjct 81 AGTGGTATTTCACTTGTGCCGGA---GCTCCCACTTATTCTACACCTCTCAAGTCATTTC 25
Query 270 ACAAAGTCGGACTAGAGTCAAGCT 293
||||||||||||||||||||||||
Sbjct 24 ACAAAGTCGGACTAGAGTCAAGCT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635025131712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |