Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq668 764 0.0 seq10574 178 4e-42 >seq668 Length=8863 Score = 764 bits (846), Expect = 0.0 Identities = 497/540 (92%), Gaps = 7/540 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 5708 CTTTTGTTCTACTCGAGATTTCTGTTCTCGATGAGTCCCCCTTAGGACACCTGCGTTATC 5649 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 5648 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 5589 Query 127 GGCCCGCGAAGGACCTT-AACGCCAGAAAATGGT-CGGTGAAGACCAGTTCCGCTTCATT 184 |||| | || |||||| || |||| || ||| | || || |||| ||||| ||||| Sbjct 5588 GGCCTGTAAAAGACCTTGAAAGCCAAAAGGTGGGACTGTTAATCCCAGCTCCGCCTCATT 5529 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244 || |||||||||| ||||||| ||||||||||||||| |||||||| ||||||||| Sbjct 5528 GAATAAGTAAAAAGACGATAAAGGTAGTGGTATTTCAACGGCGCCGAA---GCTCCCACT 5472 Query 245 TATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||| ||||||| ||| | ||| |||||||| ||| |||||||||||||||||||||||| Sbjct 5471 TATGCTACACC-CTCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTC 5413 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 5412 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 5353 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5352 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 5293 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5292 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 5233 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 5232 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 5173 >seq10574 Length=200 Score = 178 bits (196), Expect = 4e-42 Identities = 165/204 (81%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 94 ACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGC-GAAGGAC--CTTAACGCCA 150 |||||||||||||||||||| || ||||||||| || || |||| | ||| | | Sbjct 200 ACTCCCCACCTGACAATGTCCTCCGCCCGGATCGACCTGCCGAAGCAAGTCTTGGATCTA 141 Query 151 GAAAATGGTCGGTGAAGACCAG-TTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGT 209 |||| || | || || | ||||| |||| || ||||||||| |||| ||| || Sbjct 140 AAAAAAGGG-GTTGTTACCCCGCTTCCGGTTCACGGAGTAAGTAAAATAACGTTAAAAGT 82 Query 210 AGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTC 269 |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||| Sbjct 81 AGTGGTATTTCACTTGTGCCGGA---GCTCCCACTTATTCTACACCTCTCAAGTCATTTC 25 Query 270 ACAAAGTCGGACTAGAGTCAAGCT 293 |||||||||||||||||||||||| Sbjct 24 ACAAAGTCGGACTAGAGTCAAGCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635025131712