Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11]
10,694 sequences; 59,384,214 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq10572 217 5e-54
>seq10572
Length=280
Score = 217 bits (240), Expect = 5e-54
Identities = 197/244 (81%), Gaps = 3/244 (1%)
Strand=Plus/Plus
Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300
|||| ||||||||| ||| | | || || ||||| ||| ||| ||| ||| |||
Sbjct 2 CTCCTACCTATCCTGTACATGCGGTACAGACACTCAATATCAAACTACAGTAAAGCTCCA 61
Query 301 -GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359
||||||||| ||||||| |||| | ||| ||||||| || ||||| ||||||||||
Sbjct 62 TGGGGTCTTTCCGTCCTGTCGCGGGTAACCTGCATCTTCACAGGTACTAAAATTTCACCG 121
Query 360 GGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418
| || | |||||||||| | || |||||||||| ||||||| ||||||||||||||
Sbjct 122 AGTCTCTCGTTGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCCGGTCGGAACTTACC 180
Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 181 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 240
Query 479 CAAT 482
| ||
Sbjct 241 CGAT 244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702217945344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |