Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq10572 217 5e-54 >seq10572 Length=280 Score = 217 bits (240), Expect = 5e-54 Identities = 197/244 (81%), Gaps = 3/244 (1%) Strand=Plus/Plus Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 |||| ||||||||| ||| | | || || ||||| ||| ||| ||| ||| ||| Sbjct 2 CTCCTACCTATCCTGTACATGCGGTACAGACACTCAATATCAAACTACAGTAAAGCTCCA 61 Query 301 -GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 ||||||||| ||||||| |||| | ||| ||||||| || ||||| |||||||||| Sbjct 62 TGGGGTCTTTCCGTCCTGTCGCGGGTAACCTGCATCTTCACAGGTACTAAAATTTCACCG 121 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 | || | |||||||||| | || |||||||||| ||||||| |||||||||||||| Sbjct 122 AGTCTCTCGTTGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCCGGTCGGAACTTACC 180 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 181 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 240 Query 479 CAAT 482 | || Sbjct 241 CGAT 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702217945344