Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11] 10,694 sequences; 59,384,214 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq668 749 0.0 seq10448 320 5e-85 seq3024 214 5e-53 >seq668 Length=8863 Score = 749 bits (830), Expect = 0.0 Identities = 474/508 (93%), Gaps = 4/508 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||| Sbjct 1108 GTACTCATTCCAATTATAAGACCCGAAAGAGCCCTATATTGTTATTTATTGTCACTACCT 1049 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1048 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 989 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 988 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 929 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 928 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCA 869 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAA-GGAGCCCCGAAGGGCGTTGG 299 ||||||||||||||||| |||||||||||||||||||| ||||| ||| ||||||| Sbjct 868 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAAGGGAGCGGCGAGCCGCGTTGG 809 Query 300 TTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTC 357 |||||||||||||||||||||||||||| |||||||||| || | |||||||||||||| Sbjct 808 TTTTTTATCTAATAAATACACCCCTTCCGGAAGTCGGGGCTTGATTGCATGTATTAGCTC 749 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||| Sbjct 748 TAGAATTACCACAGTTATCCATGTAGCAAGGTACCATCAAATAAACTATAACTGATTTAA 689 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATC 476 |||||||||||||||||||| ||| | | ||| ||||||||||||||||||||||||||| Sbjct 688 TGAGCCATTCGCAGTTTCACAGTACAAATTTGTTTATACTTAGACATGCATGGCTTAATC 629 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 628 TTTGAGACAAGCATATGACTACTGGCAG 601 >seq10448 Length=384 Score = 320 bits (354), Expect = 5e-85 Identities = 261/309 (84%), Gaps = 12/309 (4%) Strand=Plus/Plus Query 205 TGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAA-GGCCATGCGATTCGTTAAGT 263 ||||||||||||||||||||||| | ||||| || ||| ||||||||||| ||| ||| Sbjct 1 TGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACAAAGGCCATGCGATCCGTCGAGT 60 Query 264 TATTATGAATCACCAAGGAGCCCCGA----AGG--GCGTTGGTTTTTTATCTAATAAATA 317 ||| |||||||| || |||| || || |||| | ||||||||||||||| Sbjct 61 TATCATGAATCATCA--GAGCAACGGGCAGAGCCCGCGTCGACCTTTTATCTAATAAATG 118 Query 318 CACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATC 376 || ||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||||| Sbjct 119 CATCCCTTCCAGAAGTCGGGGTTTGTTGCATGTATTAGCTCTAGAATTACTACGGTTATC 178 Query 377 CATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCA 436 | |||||| | ||| |||||| |||| |||||||||||||||||||||||||||||||| Sbjct 179 CGAGTAGTA-GTTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCA 237 Query 437 CTGTATAGATTGCTT-ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 495 | || | ||| || ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 238 CAGTCTGAATTCGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 297 Query 496 TACTGGCAG 504 ||||||||| Sbjct 298 TACTGGCAG 306 >seq3024 Length=277 Score = 214 bits (236), Expect = 5e-53 Identities = 165/197 (84%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| |||| || |||| ||||| ||| |||||||||| ||||||| Sbjct 89 GTACTCATTCCAATTATAAGATCCGAAAGGGCCCTATATTGTTATTTATTGTTACTACCT 148 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||| |||| |||||||||||||||| ||||||||||||| |||||| ||||||||||| Sbjct 149 CCCCATGTCAGGATTGGGTAATTTGCATGCCTGCTGCCTTCTTTGGATATGGTAGCCGTT 208 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 | |||||||| ||||| |||||| |||||| ||| ||| |||| || |||||| Sbjct 209 TTTCAGGCTCTCTCTCTGGAATCAAACCCTTATT--------CCCATTGAAACTATGGTA 260 Query 181 GGCCACTATCCTACCAT 197 |||| |||||||||||| Sbjct 261 GGCCTCTATCCTACCAT 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510238477824