Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001661215.1_202016-05-11]
10,694 sequences; 59,384,214 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq668 749 0.0
seq10448 320 5e-85
seq3024 214 5e-53
>seq668
Length=8863
Score = 749 bits (830), Expect = 0.0
Identities = 474/508 (93%), Gaps = 4/508 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||| ||||||| |||||||||| ||| ||||||||||||||||||
Sbjct 1108 GTACTCATTCCAATTATAAGACCCGAAAGAGCCCTATATTGTTATTTATTGTCACTACCT 1049
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1048 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 989
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 988 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 929
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 928 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCA 869
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAA-GGAGCCCCGAAGGGCGTTGG 299
||||||||||||||||| |||||||||||||||||||| ||||| ||| |||||||
Sbjct 868 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAAGGGAGCGGCGAGCCGCGTTGG 809
Query 300 TTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTC 357
|||||||||||||||||||||||||||| |||||||||| || | ||||||||||||||
Sbjct 808 TTTTTTATCTAATAAATACACCCCTTCCGGAAGTCGGGGCTTGATTGCATGTATTAGCTC 749
Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417
|||||||||||| ||||||||||||| ||||||| ||||||||||| |||||||||||||
Sbjct 748 TAGAATTACCACAGTTATCCATGTAGCAAGGTACCATCAAATAAACTATAACTGATTTAA 689
Query 418 TGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATC 476
|||||||||||||||||||| ||| | | ||| |||||||||||||||||||||||||||
Sbjct 688 TGAGCCATTCGCAGTTTCACAGTACAAATTTGTTTATACTTAGACATGCATGGCTTAATC 629
Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||
Sbjct 628 TTTGAGACAAGCATATGACTACTGGCAG 601
>seq10448
Length=384
Score = 320 bits (354), Expect = 5e-85
Identities = 261/309 (84%), Gaps = 12/309 (4%)
Strand=Plus/Plus
Query 205 TGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAA-GGCCATGCGATTCGTTAAGT 263
||||||||||||||||||||||| | ||||| || ||| ||||||||||| ||| |||
Sbjct 1 TGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACAAAGGCCATGCGATCCGTCGAGT 60
Query 264 TATTATGAATCACCAAGGAGCCCCGA----AGG--GCGTTGGTTTTTTATCTAATAAATA 317
||| |||||||| || |||| || || |||| | |||||||||||||||
Sbjct 61 TATCATGAATCATCA--GAGCAACGGGCAGAGCCCGCGTCGACCTTTTATCTAATAAATG 118
Query 318 CACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATC 376
|| ||||||| ||||||||||||| | ||||||||||||||||||||||| |||||||||
Sbjct 119 CATCCCTTCCAGAAGTCGGGGTTTGTTGCATGTATTAGCTCTAGAATTACTACGGTTATC 178
Query 377 CATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCA 436
| |||||| | ||| |||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 179 CGAGTAGTA-GTTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCA 237
Query 437 CTGTATAGATTGCTT-ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 495
| || | ||| || ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 238 CAGTCTGAATTCGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 297
Query 496 TACTGGCAG 504
|||||||||
Sbjct 298 TACTGGCAG 306
>seq3024
Length=277
Score = 214 bits (236), Expect = 5e-53
Identities = 165/197 (84%), Gaps = 8/197 (4%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||| |||| || |||| ||||| ||| |||||||||| |||||||
Sbjct 89 GTACTCATTCCAATTATAAGATCCGAAAGGGCCCTATATTGTTATTTATTGTTACTACCT 148
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||| |||| |||||||||||||||| ||||||||||||| |||||| |||||||||||
Sbjct 149 CCCCATGTCAGGATTGGGTAATTTGCATGCCTGCTGCCTTCTTTGGATATGGTAGCCGTT 208
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
| |||||||| ||||| |||||| |||||| ||| ||| |||| || ||||||
Sbjct 209 TTTCAGGCTCTCTCTCTGGAATCAAACCCTTATT--------CCCATTGAAACTATGGTA 260
Query 181 GGCCACTATCCTACCAT 197
|||| ||||||||||||
Sbjct 261 GGCCTCTATCCTACCAT 277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510238477824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |