Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq176 374 1e-101 seq257 358 1e-96 >seq176 Length=37954 Score = 374 bits (414), Expect = 1e-101 Identities = 237/257 (92%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6658 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 6717 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | |||||||||||||||||||| Sbjct 6718 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCAGCG 6777 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 6778 ACCAGCAAAAGCCGGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 6837 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 6838 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 6897 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 6898 AGAGCTATCAATCTGTC 6914 Score = 374 bits (414), Expect = 1e-101 Identities = 237/257 (92%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16177 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 16236 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | |||||||||||||||||||| Sbjct 16237 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCAGCG 16296 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 16297 ACCAGCAAAAGCCGGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 16356 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 16357 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 16416 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 16417 AGAGCTATCAATCTGTC 16433 Score = 374 bits (414), Expect = 1e-101 Identities = 237/257 (92%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 25697 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 25756 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | |||||||||||||||||||| Sbjct 25757 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCAGCG 25816 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 25817 ACCAGCAAAAGCCGGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 25876 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 25877 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 25936 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 25937 AGAGCTATCAATCTGTC 25953 Score = 374 bits (414), Expect = 1e-101 Identities = 237/257 (92%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 35217 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 35276 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | |||||||||||||||||||| Sbjct 35277 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCAGCG 35336 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 35337 ACCAGCAAAAGCCGGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 35396 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 35397 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 35456 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 35457 AGAGCTATCAATCTGTC 35473 >seq257 Length=1005854 Score = 358 bits (396), Expect = 1e-96 Identities = 234/257 (91%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1004687 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 1004746 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | |||||||||||||||||||| Sbjct 1004747 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCAGCG 1004806 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1004807 ACCAGCAAAAGCCGGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 1004866 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| Sbjct 1004867 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCAC--ACCATAAAATCATGAA 1004924 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 1004925 AGAGCTATCAATCTGTC 1004941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796797553077