Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq176 223 4e-56 seq257 212 7e-53 >seq176 Length=37954 Score = 223 bits (246), Expect = 4e-56 Identities = 169/197 (86%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 7297 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 7356 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7357 ATTCAGGCGCAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 7416 Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 7417 CGACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 7476 Query 179 TCGCCGTGAGGCGGACC 195 | |||| ||||||||| Sbjct 7477 ACACCGTTAGGCGGACC 7493 Score = 223 bits (246), Expect = 4e-56 Identities = 169/197 (86%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 16816 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 16875 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16876 ATTCAGGCGCAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 16935 Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 16936 CGACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 16995 Query 179 TCGCCGTGAGGCGGACC 195 | |||| ||||||||| Sbjct 16996 ACACCGTTAGGCGGACC 17012 Score = 223 bits (246), Expect = 4e-56 Identities = 169/197 (86%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 26336 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 26395 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 26396 ATTCAGGCGCAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 26455 Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 26456 CGACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 26515 Query 179 TCGCCGTGAGGCGGACC 195 | |||| ||||||||| Sbjct 26516 ACACCGTTAGGCGGACC 26532 Score = 223 bits (246), Expect = 4e-56 Identities = 169/197 (86%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 35856 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 35915 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 35916 ATTCAGGCGCAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 35975 Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 35976 CGACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 36035 Query 179 TCGCCGTGAGGCGGACC 195 | |||| ||||||||| Sbjct 36036 ACACCGTTAGGCGGACC 36052 >seq257 Length=1005854 Score = 212 bits (234), Expect = 7e-53 Identities = 168/198 (85%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 1005323 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 1005382 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1005383 ATTCAGGCGCAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 1005442 Query 121 C--CGCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTA 177 | | ||| ||| |||| ||||| | |||||||||||||||| | | | | ||||| Sbjct 1005443 CGACACACCCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTA 1005502 Query 178 CTCGCCGTGAGGCGGACC 195 | |||| ||||||||| Sbjct 1005503 -ACACCGTTAGGCGGACC 1005519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595198172178