Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kockovaella_20imperatae_20[genbank_20GCA_5F002102565.1_202017-04-20]
38 sequences; 17,465,713 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq29 381 1e-103
seq27 381 1e-103
seq26 381 1e-103
>seq29
Length=1906
Score = 381 bits (422), Expect = 1e-103
Identities = 274/313 (88%), Gaps = 2/313 (1%)
Strand=Plus/Plus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGAT-CCGCATGCCCTTCACTGGGTGTGCCGGGGAG 65
||||||| ||||||| ||| |||| || ||||||| |||| ||||||||||| | |||
Sbjct 1370 GTCCGGCTGGGCCTTACCTCCTGGTGAGGCCGCATGTCCTTTACTGGGTGTGCGGTGGAA 1429
Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125
|||||| |||||| |||| |||||||||||||||||||||||| | ||| ||||||||||
Sbjct 1430 CCAGGAATTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATACATT 1489
Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1490 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTA 1549
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||||||||| |||||||| | ||||||| ||| ||||||||||||||| ||
Sbjct 1550 ATGATTAATAGGGACGGTCGGGGGCATTAGTATTCCGTTGCTAGAGGTGAAATTCTTAGA 1609
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
|||| ||||||||||| |||||||||| || ||||||| ||||||||| |||| |||
Sbjct 1610 TTTACGGAAGACTAACTTCTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAA 1668
Query 306 CGAAAGTTAGGGG 318
|||| ||||||||
Sbjct 1669 CGAAGGTTAGGGG 1681
>seq27
Length=18150
Score = 381 bits (422), Expect = 1e-103
Identities = 274/313 (88%), Gaps = 2/313 (1%)
Strand=Plus/Plus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGAT-CCGCATGCCCTTCACTGGGTGTGCCGGGGAG 65
||||||| ||||||| ||| |||| || ||||||| |||| ||||||||||| | |||
Sbjct 5511 GTCCGGCTGGGCCTTACCTCCTGGTGAGGCCGCATGTCCTTTACTGGGTGTGCGGTGGAA 5570
Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125
|||||| |||||| |||| |||||||||||||||||||||||| | ||| ||||||||||
Sbjct 5571 CCAGGAATTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATACATT 5630
Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 5631 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTA 5690
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||||||||| |||||||| | ||||||| ||| ||||||||||||||| ||
Sbjct 5691 ATGATTAATAGGGACGGTCGGGGGCATTAGTATTCCGTTGCTAGAGGTGAAATTCTTAGA 5750
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
|||| ||||||||||| |||||||||| || ||||||| ||||||||| |||| |||
Sbjct 5751 TTTACGGAAGACTAACTTCTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAA 5809
Query 306 CGAAAGTTAGGGG 318
|||| ||||||||
Sbjct 5810 CGAAGGTTAGGGG 5822
Score = 381 bits (422), Expect = 1e-103
Identities = 274/313 (88%), Gaps = 2/313 (1%)
Strand=Plus/Plus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGAT-CCGCATGCCCTTCACTGGGTGTGCCGGGGAG 65
||||||| ||||||| ||| |||| || ||||||| |||| ||||||||||| | |||
Sbjct 13225 GTCCGGCTGGGCCTTACCTCCTGGTGAGGCCGCATGTCCTTTACTGGGTGTGCGGTGGAA 13284
Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125
|||||| |||||| |||| |||||||||||||||||||||||| | ||| ||||||||||
Sbjct 13285 CCAGGAATTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATACATT 13344
Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 13345 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTA 13404
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||||||||| |||||||| | ||||||| ||| ||||||||||||||| ||
Sbjct 13405 ATGATTAATAGGGACGGTCGGGGGCATTAGTATTCCGTTGCTAGAGGTGAAATTCTTAGA 13464
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
|||| ||||||||||| |||||||||| || ||||||| ||||||||| |||| |||
Sbjct 13465 TTTACGGAAGACTAACTTCTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAA 13523
Query 306 CGAAAGTTAGGGG 318
|||| ||||||||
Sbjct 13524 CGAAGGTTAGGGG 13536
>seq26
Length=18679
Score = 381 bits (422), Expect = 1e-103
Identities = 274/313 (88%), Gaps = 2/313 (1%)
Strand=Plus/Minus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGAT-CCGCATGCCCTTCACTGGGTGTGCCGGGGAG 65
||||||| ||||||| ||| |||| || ||||||| |||| ||||||||||| | |||
Sbjct 1743 GTCCGGCTGGGCCTTACCTCCTGGTGAGGCCGCATGTCCTTTACTGGGTGTGCGGTGGAA 1684
Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125
|||||| |||||| |||| |||||||||||||||||||||||| | ||| ||||||||||
Sbjct 1683 CCAGGAATTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATACATT 1624
Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1623 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTA 1564
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||||||||| |||||||| | ||||||| ||| ||||||||||||||| ||
Sbjct 1563 ATGATTAATAGGGACGGTCGGGGGCATTAGTATTCCGTTGCTAGAGGTGAAATTCTTAGA 1504
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
|||| ||||||||||| |||||||||| || ||||||| ||||||||| |||| |||
Sbjct 1503 TTTACGGAAGACTAACTTCTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAA 1445
Query 306 CGAAAGTTAGGGG 318
|||| ||||||||
Sbjct 1444 CGAAGGTTAGGGG 1432
Score = 381 bits (422), Expect = 1e-103
Identities = 274/313 (88%), Gaps = 2/313 (1%)
Strand=Plus/Minus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGAT-CCGCATGCCCTTCACTGGGTGTGCCGGGGAG 65
||||||| ||||||| ||| |||| || ||||||| |||| ||||||||||| | |||
Sbjct 9456 GTCCGGCTGGGCCTTACCTCCTGGTGAGGCCGCATGTCCTTTACTGGGTGTGCGGTGGAA 9397
Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125
|||||| |||||| |||| |||||||||||||||||||||||| | ||| ||||||||||
Sbjct 9396 CCAGGAATTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATACATT 9337
Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 9336 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTA 9277
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||||||||| |||||||| | ||||||| ||| ||||||||||||||| ||
Sbjct 9276 ATGATTAATAGGGACGGTCGGGGGCATTAGTATTCCGTTGCTAGAGGTGAAATTCTTAGA 9217
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
|||| ||||||||||| |||||||||| || ||||||| ||||||||| |||| |||
Sbjct 9216 TTTACGGAAGACTAACTTCTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAA 9158
Query 306 CGAAAGTTAGGGG 318
|||| ||||||||
Sbjct 9157 CGAAGGTTAGGGG 9145
Score = 381 bits (422), Expect = 1e-103
Identities = 274/313 (88%), Gaps = 2/313 (1%)
Strand=Plus/Minus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGAT-CCGCATGCCCTTCACTGGGTGTGCCGGGGAG 65
||||||| ||||||| ||| |||| || ||||||| |||| ||||||||||| | |||
Sbjct 17170 GTCCGGCTGGGCCTTACCTCCTGGTGAGGCCGCATGTCCTTTACTGGGTGTGCGGTGGAA 17111
Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125
|||||| |||||| |||| |||||||||||||||||||||||| | ||| ||||||||||
Sbjct 17110 CCAGGAATTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATACATT 17051
Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 17050 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTA 16991
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||||||||| |||||||| | ||||||| ||| ||||||||||||||| ||
Sbjct 16990 ATGATTAATAGGGACGGTCGGGGGCATTAGTATTCCGTTGCTAGAGGTGAAATTCTTAGA 16931
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
|||| ||||||||||| |||||||||| || ||||||| ||||||||| |||| |||
Sbjct 16930 TTTACGGAAGACTAACTTCTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAA 16872
Query 306 CGAAAGTTAGGGG 318
|||| ||||||||
Sbjct 16871 CGAAGGTTAGGGG 16859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199652224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |