Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kockovaella_20imperatae_20[genbank_20GCA_5F002102565.1_202017-04-20]
38 sequences; 17,465,713 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq27 540 4e-151
seq26 540 4e-151
>seq27
Length=18150
Score = 540 bits (598), Expect = 4e-151
Identities = 530/680 (78%), Gaps = 39/680 (6%)
Strand=Plus/Plus
Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93
||| ||||||||||||||||||||||||||||| ||||||| ||| | || | |||||||
Sbjct 7346 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAGTTCCATCTAAAG 7405
Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153
|||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||
Sbjct 7406 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACT 7465
Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213
||||||||||||||||| || |||||||||||||||||||||| || ||| | ||| |
Sbjct 7466 TTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCG 7525
Query 214 TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCAT 273
|| || | | ||| |||| | ||||||| | || || || | || || |||
Sbjct 7526 TGTCCATGGG-GTTCAGCCGGT---TATGCCGGTGTATTCCCCTT-GGACGGGTCAACAT 7580
Query 274 CAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGC 333
||| | || | | ||| || || |||| || || | || || |||||||||
Sbjct 7581 CAGTTTGGACCGGTGGAAAAGGGTAGTTGGAAGGTAGCAGC--TCCGGCTGTGTTATAGA 7638
Query 334 C--------------CGGGGT--------GGAATGCGGCCCGCC----TGGACTGAGGT- 366
| | || | || |||| || |||| ||| | | | |
Sbjct 7639 CTTCTACCGCATACACTGGTTCAGACTGAGGCATGCAGCTCGCCCTTGTGGCCGGGGTTT 7698
Query 367 --CCGCGCTCCGGCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACG 423
| || | ||| |||||| || | |||||| | ||| || ||||||||| ||||||
Sbjct 7699 ACCTACGTACGAGCTTAGGATGTTGACATAATGGCTTTAAACGACCCGTCTTGAAACACG 7758
Query 424 GACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAA 483
|||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct 7759 GACCAAGGAGTCTAACATATCTGCGAGTGTTTGGGTGTCAAACCCGGACGCGTAATGAAA 7818
Query 484 GTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATG 543
||||||| ||| |||| || | || ||||| |||||||||| ||| | || ||||
Sbjct 7819 GTGAACGTAGGAGGGATCCGC--AAGGAGCACCTTCGACCGATCTGGATCTTTTGTGATG 7876
Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 7877 GATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 7936
Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663
|||||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||||
Sbjct 7937 CGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTC 7996
Query 664 AAATTTGGGTATAGGGGCGA 683
||||||||||||||||||||
Sbjct 7997 AAATTTGGGTATAGGGGCGA 8016
Score = 540 bits (598), Expect = 4e-151
Identities = 530/680 (78%), Gaps = 39/680 (6%)
Strand=Plus/Plus
Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93
||| ||||||||||||||||||||||||||||| ||||||| ||| | || | |||||||
Sbjct 15060 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAGTTCCATCTAAAG 15119
Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153
|||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||
Sbjct 15120 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACT 15179
Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213
||||||||||||||||| || |||||||||||||||||||||| || ||| | ||| |
Sbjct 15180 TTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCG 15239
Query 214 TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCAT 273
|| || | | ||| |||| | ||||||| | || || || | || || |||
Sbjct 15240 TGTCCATGGG-GTTCAGCCGGT---TATGCCGGTGTATTCCCCTT-GGACGGGTCAACAT 15294
Query 274 CAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGC 333
||| | || | | ||| || || |||| || || | || || |||||||||
Sbjct 15295 CAGTTTGGACCGGTGGAAAAGGGTAGTTGGAAGGTAGCAGC--TCCGGCTGTGTTATAGA 15352
Query 334 C--------------CGGGGT--------GGAATGCGGCCCGCC----TGGACTGAGGT- 366
| | || | || |||| || |||| ||| | | | |
Sbjct 15353 CTTCTACCGCATACACTGGTTCAGACTGAGGCATGCAGCTCGCCCTTGTGGCCGGGGTTT 15412
Query 367 --CCGCGCTCCGGCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACG 423
| || | ||| |||||| || | |||||| | ||| || ||||||||| ||||||
Sbjct 15413 ACCTACGTACGAGCTTAGGATGTTGACATAATGGCTTTAAACGACCCGTCTTGAAACACG 15472
Query 424 GACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAA 483
|||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct 15473 GACCAAGGAGTCTAACATATCTGCGAGTGTTTGGGTGTCAAACCCGGACGCGTAATGAAA 15532
Query 484 GTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATG 543
||||||| ||| |||| || | || ||||| |||||||||| ||| | || ||||
Sbjct 15533 GTGAACGTAGGAGGGATCCGC--AAGGAGCACCTTCGACCGATCTGGATCTTTTGTGATG 15590
Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 15591 GATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 15650
Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663
|||||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||||
Sbjct 15651 CGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTC 15710
Query 664 AAATTTGGGTATAGGGGCGA 683
||||||||||||||||||||
Sbjct 15711 AAATTTGGGTATAGGGGCGA 15730
Score = 379 bits (420), Expect = 8e-103
Identities = 268/304 (88%), Gaps = 3/304 (1%)
Strand=Plus/Plus
Query 381 GGATGCTGGCGTAATGG-TTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||| || | |||||| || ||| || ||||||||| ||||||||||||||||||||||
Sbjct 1 GGATGTTGACATAATGGCTTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAAC 60
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
|| | ||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||
Sbjct 61 ATATCTGCGAGTGTTTGGGTGTCAAACCCGGACGCGTAATGAAAGTGAACGTAGGAGGGA 120
Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559
|| | || ||||| |||||||||| ||| | || ||||||||||||||||||||
Sbjct 121 TCCGC--AAGGAGCACCTTCGACCGATCTGGATCTTTTGTGATGGATTTGAGTAAGAGCA 178
Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619
|| || ||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 179 TATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGGGGAAAC 238
Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 239 TCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGG 298
Query 680 GCGA 683
||||
Sbjct 299 GCGA 302
>seq26
Length=18679
Score = 540 bits (598), Expect = 4e-151
Identities = 530/680 (78%), Gaps = 39/680 (6%)
Strand=Plus/Minus
Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93
||| ||||||||||||||||||||||||||||| ||||||| ||| | || | |||||||
Sbjct 7621 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAGTTCCATCTAAAG 7562
Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153
|||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||
Sbjct 7561 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACT 7502
Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213
||||||||||||||||| || |||||||||||||||||||||| || ||| | ||| |
Sbjct 7501 TTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCG 7442
Query 214 TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCAT 273
|| || | | ||| |||| | ||||||| | || || || | || || |||
Sbjct 7441 TGTCCATGGG-GTTCAGCCGGT---TATGCCGGTGTATTCCCCTT-GGACGGGTCAACAT 7387
Query 274 CAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGC 333
||| | || | | ||| || || |||| || || | || || |||||||||
Sbjct 7386 CAGTTTGGACCGGTGGAAAAGGGTAGTTGGAAGGTAGCAGC--TCCGGCTGTGTTATAGA 7329
Query 334 C--------------CGGGGT--------GGAATGCGGCCCGCC----TGGACTGAGGT- 366
| | || | || |||| || |||| ||| | | | |
Sbjct 7328 CTTCTACCGCATACACTGGTTCAGACTGAGGCATGCAGCTCGCCCTTGTGGCCGGGGTTT 7269
Query 367 --CCGCGCTCCGGCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACG 423
| || | ||| |||||| || | |||||| | ||| || ||||||||| ||||||
Sbjct 7268 ACCTACGTACGAGCTTAGGATGTTGACATAATGGCTTTAAACGACCCGTCTTGAAACACG 7209
Query 424 GACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAA 483
|||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct 7208 GACCAAGGAGTCTAACATATCTGCGAGTGTTTGGGTGTCAAACCCGGACGCGTAATGAAA 7149
Query 484 GTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATG 543
||||||| ||| |||| || | || ||||| |||||||||| ||| | || ||||
Sbjct 7148 GTGAACGTAGGAGGGATCCGC--AAGGAGCACCTTCGACCGATCTGGATCTTTTGTGATG 7091
Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 7090 GATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 7031
Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663
|||||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||||
Sbjct 7030 CGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTC 6971
Query 664 AAATTTGGGTATAGGGGCGA 683
||||||||||||||||||||
Sbjct 6970 AAATTTGGGTATAGGGGCGA 6951
Score = 540 bits (598), Expect = 4e-151
Identities = 530/680 (78%), Gaps = 39/680 (6%)
Strand=Plus/Minus
Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93
||| ||||||||||||||||||||||||||||| ||||||| ||| | || | |||||||
Sbjct 15335 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAGTTCCATCTAAAG 15276
Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153
|||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||
Sbjct 15275 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACT 15216
Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213
||||||||||||||||| || |||||||||||||||||||||| || ||| | ||| |
Sbjct 15215 TTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCG 15156
Query 214 TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCAT 273
|| || | | ||| |||| | ||||||| | || || || | || || |||
Sbjct 15155 TGTCCATGGG-GTTCAGCCGGT---TATGCCGGTGTATTCCCCTT-GGACGGGTCAACAT 15101
Query 274 CAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGC 333
||| | || | | ||| || || |||| || || | || || |||||||||
Sbjct 15100 CAGTTTGGACCGGTGGAAAAGGGTAGTTGGAAGGTAGCAGC--TCCGGCTGTGTTATAGA 15043
Query 334 C--------------CGGGGT--------GGAATGCGGCCCGCC----TGGACTGAGGT- 366
| | || | || |||| || |||| ||| | | | |
Sbjct 15042 CTTCTACCGCATACACTGGTTCAGACTGAGGCATGCAGCTCGCCCTTGTGGCCGGGGTTT 14983
Query 367 --CCGCGCTCCGGCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACG 423
| || | ||| |||||| || | |||||| | ||| || ||||||||| ||||||
Sbjct 14982 ACCTACGTACGAGCTTAGGATGTTGACATAATGGCTTTAAACGACCCGTCTTGAAACACG 14923
Query 424 GACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAA 483
|||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct 14922 GACCAAGGAGTCTAACATATCTGCGAGTGTTTGGGTGTCAAACCCGGACGCGTAATGAAA 14863
Query 484 GTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATG 543
||||||| ||| |||| || | || ||||| |||||||||| ||| | || ||||
Sbjct 14862 GTGAACGTAGGAGGGATCCGC--AAGGAGCACCTTCGACCGATCTGGATCTTTTGTGATG 14805
Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 14804 GATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 14745
Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663
|||||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||||
Sbjct 14744 CGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTC 14685
Query 664 AAATTTGGGTATAGGGGCGA 683
||||||||||||||||||||
Sbjct 14684 AAATTTGGGTATAGGGGCGA 14665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999184900
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