Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kockovaella_20imperatae_20[genbank_20GCA_5F002102565.1_202017-04-20] 38 sequences; 17,465,713 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq27 540 4e-151 seq26 540 4e-151 >seq27 Length=18150 Score = 540 bits (598), Expect = 4e-151 Identities = 530/680 (78%), Gaps = 39/680 (6%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| ||||||||||||||||||||||||||||| ||||||| ||| | || | ||||||| Sbjct 7346 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAGTTCCATCTAAAG 7405 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||| Sbjct 7406 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACT 7465 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||||||||||||||||| || |||||||||||||||||||||| || ||| | ||| | Sbjct 7466 TTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCG 7525 Query 214 TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCAT 273 || || | | ||| |||| | ||||||| | || || || | || || ||| Sbjct 7526 TGTCCATGGG-GTTCAGCCGGT---TATGCCGGTGTATTCCCCTT-GGACGGGTCAACAT 7580 Query 274 CAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGC 333 ||| | || | | ||| || || |||| || || | || || ||||||||| Sbjct 7581 CAGTTTGGACCGGTGGAAAAGGGTAGTTGGAAGGTAGCAGC--TCCGGCTGTGTTATAGA 7638 Query 334 C--------------CGGGGT--------GGAATGCGGCCCGCC----TGGACTGAGGT- 366 | | || | || |||| || |||| ||| | | | | Sbjct 7639 CTTCTACCGCATACACTGGTTCAGACTGAGGCATGCAGCTCGCCCTTGTGGCCGGGGTTT 7698 Query 367 --CCGCGCTCCGGCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACG 423 | || | ||| |||||| || | |||||| | ||| || ||||||||| |||||| Sbjct 7699 ACCTACGTACGAGCTTAGGATGTTGACATAATGGCTTTAAACGACCCGTCTTGAAACACG 7758 Query 424 GACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAA 483 |||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||| Sbjct 7759 GACCAAGGAGTCTAACATATCTGCGAGTGTTTGGGTGTCAAACCCGGACGCGTAATGAAA 7818 Query 484 GTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATG 543 ||||||| ||| |||| || | || ||||| |||||||||| ||| | || |||| Sbjct 7819 GTGAACGTAGGAGGGATCCGC--AAGGAGCACCTTCGACCGATCTGGATCTTTTGTGATG 7876 Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603 |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 7877 GATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 7936 Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 |||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct 7937 CGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTC 7996 Query 664 AAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| Sbjct 7997 AAATTTGGGTATAGGGGCGA 8016 Score = 540 bits (598), Expect = 4e-151 Identities = 530/680 (78%), Gaps = 39/680 (6%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| ||||||||||||||||||||||||||||| ||||||| ||| | || | ||||||| Sbjct 15060 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAGTTCCATCTAAAG 15119 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||| Sbjct 15120 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACT 15179 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||||||||||||||||| || |||||||||||||||||||||| || ||| | ||| | Sbjct 15180 TTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCG 15239 Query 214 TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCAT 273 || || | | ||| |||| | ||||||| | || || || | || || ||| Sbjct 15240 TGTCCATGGG-GTTCAGCCGGT---TATGCCGGTGTATTCCCCTT-GGACGGGTCAACAT 15294 Query 274 CAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGC 333 ||| | || | | ||| || || |||| || || | || || ||||||||| Sbjct 15295 CAGTTTGGACCGGTGGAAAAGGGTAGTTGGAAGGTAGCAGC--TCCGGCTGTGTTATAGA 15352 Query 334 C--------------CGGGGT--------GGAATGCGGCCCGCC----TGGACTGAGGT- 366 | | || | || |||| || |||| ||| | | | | Sbjct 15353 CTTCTACCGCATACACTGGTTCAGACTGAGGCATGCAGCTCGCCCTTGTGGCCGGGGTTT 15412 Query 367 --CCGCGCTCCGGCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACG 423 | || | ||| |||||| || | |||||| | ||| || ||||||||| |||||| Sbjct 15413 ACCTACGTACGAGCTTAGGATGTTGACATAATGGCTTTAAACGACCCGTCTTGAAACACG 15472 Query 424 GACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAA 483 |||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||| Sbjct 15473 GACCAAGGAGTCTAACATATCTGCGAGTGTTTGGGTGTCAAACCCGGACGCGTAATGAAA 15532 Query 484 GTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATG 543 ||||||| ||| |||| || | || ||||| |||||||||| ||| | || |||| Sbjct 15533 GTGAACGTAGGAGGGATCCGC--AAGGAGCACCTTCGACCGATCTGGATCTTTTGTGATG 15590 Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603 |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 15591 GATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 15650 Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 |||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct 15651 CGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTC 15710 Query 664 AAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| Sbjct 15711 AAATTTGGGTATAGGGGCGA 15730 Score = 379 bits (420), Expect = 8e-103 Identities = 268/304 (88%), Gaps = 3/304 (1%) Strand=Plus/Plus Query 381 GGATGCTGGCGTAATGG-TTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||| || | |||||| || ||| || ||||||||| |||||||||||||||||||||| Sbjct 1 GGATGTTGACATAATGGCTTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAAC 60 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499 || | ||||||||||||||||||||||||| ||||||||||||||||||| ||| |||| Sbjct 61 ATATCTGCGAGTGTTTGGGTGTCAAACCCGGACGCGTAATGAAAGTGAACGTAGGAGGGA 120 Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559 || | || ||||| |||||||||| ||| | || |||||||||||||||||||| Sbjct 121 TCCGC--AAGGAGCACCTTCGACCGATCTGGATCTTTTGTGATGGATTTGAGTAAGAGCA 178 Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619 || || ||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 179 TATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGGGGAAAC 238 Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 ||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 239 TCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGG 298 Query 680 GCGA 683 |||| Sbjct 299 GCGA 302 >seq26 Length=18679 Score = 540 bits (598), Expect = 4e-151 Identities = 530/680 (78%), Gaps = 39/680 (6%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| ||||||||||||||||||||||||||||| ||||||| ||| | || | ||||||| Sbjct 7621 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAGTTCCATCTAAAG 7562 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||| Sbjct 7561 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACT 7502 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||||||||||||||||| || |||||||||||||||||||||| || ||| | ||| | Sbjct 7501 TTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCG 7442 Query 214 TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCAT 273 || || | | ||| |||| | ||||||| | || || || | || || ||| Sbjct 7441 TGTCCATGGG-GTTCAGCCGGT---TATGCCGGTGTATTCCCCTT-GGACGGGTCAACAT 7387 Query 274 CAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGC 333 ||| | || | | ||| || || |||| || || | || || ||||||||| Sbjct 7386 CAGTTTGGACCGGTGGAAAAGGGTAGTTGGAAGGTAGCAGC--TCCGGCTGTGTTATAGA 7329 Query 334 C--------------CGGGGT--------GGAATGCGGCCCGCC----TGGACTGAGGT- 366 | | || | || |||| || |||| ||| | | | | Sbjct 7328 CTTCTACCGCATACACTGGTTCAGACTGAGGCATGCAGCTCGCCCTTGTGGCCGGGGTTT 7269 Query 367 --CCGCGCTCCGGCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACG 423 | || | ||| |||||| || | |||||| | ||| || ||||||||| |||||| Sbjct 7268 ACCTACGTACGAGCTTAGGATGTTGACATAATGGCTTTAAACGACCCGTCTTGAAACACG 7209 Query 424 GACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAA 483 |||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||| Sbjct 7208 GACCAAGGAGTCTAACATATCTGCGAGTGTTTGGGTGTCAAACCCGGACGCGTAATGAAA 7149 Query 484 GTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATG 543 ||||||| ||| |||| || | || ||||| |||||||||| ||| | || |||| Sbjct 7148 GTGAACGTAGGAGGGATCCGC--AAGGAGCACCTTCGACCGATCTGGATCTTTTGTGATG 7091 Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603 |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 7090 GATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 7031 Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 |||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct 7030 CGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTC 6971 Query 664 AAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| Sbjct 6970 AAATTTGGGTATAGGGGCGA 6951 Score = 540 bits (598), Expect = 4e-151 Identities = 530/680 (78%), Gaps = 39/680 (6%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| ||||||||||||||||||||||||||||| ||||||| ||| | || | ||||||| Sbjct 15335 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAGTTCCATCTAAAG 15276 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||| Sbjct 15275 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACT 15216 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||||||||||||||||| || |||||||||||||||||||||| || ||| | ||| | Sbjct 15215 TTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCG 15156 Query 214 TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCAT 273 || || | | ||| |||| | ||||||| | || || || | || || ||| Sbjct 15155 TGTCCATGGG-GTTCAGCCGGT---TATGCCGGTGTATTCCCCTT-GGACGGGTCAACAT 15101 Query 274 CAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGC 333 ||| | || | | ||| || || |||| || || | || || ||||||||| Sbjct 15100 CAGTTTGGACCGGTGGAAAAGGGTAGTTGGAAGGTAGCAGC--TCCGGCTGTGTTATAGA 15043 Query 334 C--------------CGGGGT--------GGAATGCGGCCCGCC----TGGACTGAGGT- 366 | | || | || |||| || |||| ||| | | | | Sbjct 15042 CTTCTACCGCATACACTGGTTCAGACTGAGGCATGCAGCTCGCCCTTGTGGCCGGGGTTT 14983 Query 367 --CCGCGCTCCGGCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACG 423 | || | ||| |||||| || | |||||| | ||| || ||||||||| |||||| Sbjct 14982 ACCTACGTACGAGCTTAGGATGTTGACATAATGGCTTTAAACGACCCGTCTTGAAACACG 14923 Query 424 GACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAA 483 |||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||| Sbjct 14922 GACCAAGGAGTCTAACATATCTGCGAGTGTTTGGGTGTCAAACCCGGACGCGTAATGAAA 14863 Query 484 GTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATG 543 ||||||| ||| |||| || | || ||||| |||||||||| ||| | || |||| Sbjct 14862 GTGAACGTAGGAGGGATCCGC--AAGGAGCACCTTCGACCGATCTGGATCTTTTGTGATG 14805 Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603 |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 14804 GATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 14745 Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 |||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct 14744 CGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTC 14685 Query 664 AAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| Sbjct 14684 AAATTTGGGTATAGGGGCGA 14665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999184900